Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.69■□□□□ 0.58
TREM2Q9NZC2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.69■□□□□ 0.58
TREM2Q9NZC2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TREM2Q9NZC2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TREM2Q9NZC2 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.69■□□□□ 0.58
TREM2Q9NZC2 AC026271.2-201ENST00000428091 497 ntBASIC18.69■□□□□ 0.58
TREM2Q9NZC2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.69■□□□□ 0.58
TREM2Q9NZC2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.69■□□□□ 0.58
TREM2Q9NZC2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.69■□□□□ 0.58
TREM2Q9NZC2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TREM2Q9NZC2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TREM2Q9NZC2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TREM2Q9NZC2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.69■□□□□ 0.58
TREM2Q9NZC2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TREM2Q9NZC2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 BX842568.3-201ENST00000418104 571 ntBASIC18.68■□□□□ 0.58
TREM2Q9NZC2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TREM2Q9NZC2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TREM2Q9NZC2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TREM2Q9NZC2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TREM2Q9NZC2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TREM2Q9NZC2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.66■□□□□ 0.58
TREM2Q9NZC2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TREM2Q9NZC2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.66■□□□□ 0.58
TREM2Q9NZC2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.66■□□□□ 0.58
TREM2Q9NZC2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TREM2Q9NZC2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TREM2Q9NZC2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.66■□□□□ 0.58
TREM2Q9NZC2 GUSBP5-202ENST00000510805 1989 ntBASIC18.66■□□□□ 0.58
TREM2Q9NZC2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TREM2Q9NZC2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TREM2Q9NZC2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TREM2Q9NZC2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TREM2Q9NZC2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.65■□□□□ 0.58
TREM2Q9NZC2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.65■□□□□ 0.58
TREM2Q9NZC2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TREM2Q9NZC2 IRS3P-201ENST00000223076 1006 ntBASIC18.65■□□□□ 0.58
TREM2Q9NZC2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TREM2Q9NZC2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TREM2Q9NZC2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.65■□□□□ 0.58
TREM2Q9NZC2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TREM2Q9NZC2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TREM2Q9NZC2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TREM2Q9NZC2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TREM2Q9NZC2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
TREM2Q9NZC2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TREM2Q9NZC2 ECEL1P1-201ENST00000373592 1742 ntBASIC18.64■□□□□ 0.57
TREM2Q9NZC2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TREM2Q9NZC2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
TREM2Q9NZC2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.64■□□□□ 0.57
TREM2Q9NZC2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.64■□□□□ 0.57
TREM2Q9NZC2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TREM2Q9NZC2 MIR5787-201ENST00000611784 55 ntBASIC18.64■□□□□ 0.57
TREM2Q9NZC2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TREM2Q9NZC2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TREM2Q9NZC2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TREM2Q9NZC2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TREM2Q9NZC2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TREM2Q9NZC2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 RNF165-205ENST00000588679 2904 ntBASIC18.63■□□□□ 0.57
TREM2Q9NZC2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 AC127496.7-201ENST00000625110 1798 ntBASIC18.63■□□□□ 0.57
TREM2Q9NZC2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TREM2Q9NZC2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms