Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
THUMPD1Q9NXG2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
THUMPD1Q9NXG2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
THUMPD1Q9NXG2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
THUMPD1Q9NXG2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
THUMPD1Q9NXG2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
THUMPD1Q9NXG2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
THUMPD1Q9NXG2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
THUMPD1Q9NXG2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
THUMPD1Q9NXG2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
THUMPD1Q9NXG2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
THUMPD1Q9NXG2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.41■□□□□ 0.86
THUMPD1Q9NXG2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
THUMPD1Q9NXG2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
THUMPD1Q9NXG2 UNC93B8-201ENST00000511903 705 ntBASIC20.41■□□□□ 0.86
THUMPD1Q9NXG2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
THUMPD1Q9NXG2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.41■□□□□ 0.86
THUMPD1Q9NXG2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
THUMPD1Q9NXG2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
THUMPD1Q9NXG2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
THUMPD1Q9NXG2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
THUMPD1Q9NXG2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.41■□□□□ 0.86
THUMPD1Q9NXG2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
THUMPD1Q9NXG2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
THUMPD1Q9NXG2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.4■□□□□ 0.86
THUMPD1Q9NXG2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.4■□□□□ 0.86
THUMPD1Q9NXG2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
THUMPD1Q9NXG2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
THUMPD1Q9NXG2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.39■□□□□ 0.86
THUMPD1Q9NXG2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
THUMPD1Q9NXG2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.39■□□□□ 0.86
THUMPD1Q9NXG2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
THUMPD1Q9NXG2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
THUMPD1Q9NXG2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
THUMPD1Q9NXG2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.39■□□□□ 0.85
THUMPD1Q9NXG2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
THUMPD1Q9NXG2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
THUMPD1Q9NXG2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
THUMPD1Q9NXG2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
THUMPD1Q9NXG2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.85
THUMPD1Q9NXG2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.39■□□□□ 0.85
THUMPD1Q9NXG2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
THUMPD1Q9NXG2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
THUMPD1Q9NXG2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.39■□□□□ 0.85
THUMPD1Q9NXG2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
THUMPD1Q9NXG2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
THUMPD1Q9NXG2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.38■□□□□ 0.85
THUMPD1Q9NXG2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.38■□□□□ 0.85
THUMPD1Q9NXG2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
THUMPD1Q9NXG2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
THUMPD1Q9NXG2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
THUMPD1Q9NXG2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
THUMPD1Q9NXG2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.38■□□□□ 0.85
THUMPD1Q9NXG2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.38■□□□□ 0.85
THUMPD1Q9NXG2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
THUMPD1Q9NXG2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
THUMPD1Q9NXG2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.38■□□□□ 0.85
THUMPD1Q9NXG2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
THUMPD1Q9NXG2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
THUMPD1Q9NXG2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 KRT16P3-201ENST00000439127 1283 ntBASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
THUMPD1Q9NXG2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.36■□□□□ 0.85
THUMPD1Q9NXG2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
THUMPD1Q9NXG2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
THUMPD1Q9NXG2 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.36■□□□□ 0.85
THUMPD1Q9NXG2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
THUMPD1Q9NXG2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.36■□□□□ 0.85
THUMPD1Q9NXG2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
THUMPD1Q9NXG2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.36■□□□□ 0.85
THUMPD1Q9NXG2 AC026310.3-201ENST00000625186 2373 ntBASIC20.36■□□□□ 0.85
THUMPD1Q9NXG2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.36■□□□□ 0.85
THUMPD1Q9NXG2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
THUMPD1Q9NXG2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
THUMPD1Q9NXG2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
THUMPD1Q9NXG2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
THUMPD1Q9NXG2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
THUMPD1Q9NXG2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
THUMPD1Q9NXG2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
THUMPD1Q9NXG2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
THUMPD1Q9NXG2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
THUMPD1Q9NXG2 AL356740.2-201ENST00000601559 647 ntBASIC20.35■□□□□ 0.85
THUMPD1Q9NXG2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms