Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HINT3Q9NQE9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HINT3Q9NQE9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HINT3Q9NQE9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.62■□□□□ 0.73
HINT3Q9NQE9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.62■□□□□ 0.73
HINT3Q9NQE9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HINT3Q9NQE9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.62■□□□□ 0.73
HINT3Q9NQE9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HINT3Q9NQE9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HINT3Q9NQE9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
HINT3Q9NQE9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.61■□□□□ 0.73
HINT3Q9NQE9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HINT3Q9NQE9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HINT3Q9NQE9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HINT3Q9NQE9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HINT3Q9NQE9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HINT3Q9NQE9 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.61■□□□□ 0.73
HINT3Q9NQE9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.61■□□□□ 0.73
HINT3Q9NQE9 CA15P2-201ENST00000611168 834 ntBASIC19.61■□□□□ 0.73
HINT3Q9NQE9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HINT3Q9NQE9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HINT3Q9NQE9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HINT3Q9NQE9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
HINT3Q9NQE9 AC009102.2-201ENST00000606772 1639 ntBASIC19.61■□□□□ 0.73
HINT3Q9NQE9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HINT3Q9NQE9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HINT3Q9NQE9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.61■□□□□ 0.73
HINT3Q9NQE9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HINT3Q9NQE9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
HINT3Q9NQE9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HINT3Q9NQE9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HINT3Q9NQE9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HINT3Q9NQE9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HINT3Q9NQE9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HINT3Q9NQE9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HINT3Q9NQE9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HINT3Q9NQE9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HINT3Q9NQE9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.6■□□□□ 0.73
HINT3Q9NQE9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HINT3Q9NQE9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HINT3Q9NQE9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HINT3Q9NQE9 PKD1P6-201ENST00000343738 4769 ntBASIC19.59■□□□□ 0.73
HINT3Q9NQE9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.59■□□□□ 0.73
HINT3Q9NQE9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HINT3Q9NQE9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.59■□□□□ 0.73
HINT3Q9NQE9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HINT3Q9NQE9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.59■□□□□ 0.73
HINT3Q9NQE9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.59■□□□□ 0.73
HINT3Q9NQE9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
HINT3Q9NQE9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HINT3Q9NQE9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HINT3Q9NQE9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HINT3Q9NQE9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HINT3Q9NQE9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.58■□□□□ 0.73
HINT3Q9NQE9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
HINT3Q9NQE9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.58■□□□□ 0.72
HINT3Q9NQE9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HINT3Q9NQE9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.58■□□□□ 0.72
HINT3Q9NQE9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HINT3Q9NQE9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HINT3Q9NQE9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HINT3Q9NQE9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.58■□□□□ 0.72
HINT3Q9NQE9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HINT3Q9NQE9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.57■□□□□ 0.72
HINT3Q9NQE9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.57■□□□□ 0.72
HINT3Q9NQE9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.57■□□□□ 0.72
HINT3Q9NQE9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HINT3Q9NQE9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HINT3Q9NQE9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HINT3Q9NQE9 AL356740.2-201ENST00000601559 647 ntBASIC19.57■□□□□ 0.72
HINT3Q9NQE9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HINT3Q9NQE9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HINT3Q9NQE9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HINT3Q9NQE9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HINT3Q9NQE9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HINT3Q9NQE9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HINT3Q9NQE9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HINT3Q9NQE9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HINT3Q9NQE9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HINT3Q9NQE9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HINT3Q9NQE9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HINT3Q9NQE9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.56■□□□□ 0.72
HINT3Q9NQE9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
HINT3Q9NQE9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms