Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDH18Q9HCL0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH18Q9HCL0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
PCDH18Q9HCL0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH18Q9HCL0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
PCDH18Q9HCL0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH18Q9HCL0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH18Q9HCL0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDH18Q9HCL0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH18Q9HCL0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH18Q9HCL0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH18Q9HCL0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDH18Q9HCL0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH18Q9HCL0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH18Q9HCL0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH18Q9HCL0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH18Q9HCL0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDH18Q9HCL0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH18Q9HCL0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDH18Q9HCL0 SLC47A1P1-202ENST00000449666 945 ntBASIC22.56■■□□□ 1.2
PCDH18Q9HCL0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH18Q9HCL0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDH18Q9HCL0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH18Q9HCL0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDH18Q9HCL0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
PCDH18Q9HCL0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH18Q9HCL0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDH18Q9HCL0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDH18Q9HCL0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH18Q9HCL0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH18Q9HCL0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH18Q9HCL0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH18Q9HCL0 AC068587.7-201ENST00000641602 218 ntBASIC22.55■■□□□ 1.2
PCDH18Q9HCL0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH18Q9HCL0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH18Q9HCL0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDH18Q9HCL0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH18Q9HCL0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDH18Q9HCL0 C11orf96-202ENST00000528572 1834 ntBASIC22.54■■□□□ 1.2
PCDH18Q9HCL0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH18Q9HCL0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PCDH18Q9HCL0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH18Q9HCL0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH18Q9HCL0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH18Q9HCL0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDH18Q9HCL0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH18Q9HCL0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDH18Q9HCL0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH18Q9HCL0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH18Q9HCL0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH18Q9HCL0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDH18Q9HCL0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 AC079089.2-201ENST00000531211 1277 ntBASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 AC024257.2-201ENST00000549699 147 ntBASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 AL136162.1-201ENST00000607711 1078 ntBASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PCDH18Q9HCL0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH18Q9HCL0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH18Q9HCL0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PCDH18Q9HCL0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH18Q9HCL0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH18Q9HCL0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDH18Q9HCL0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDH18Q9HCL0 MIR4767-201ENST00000582827 78 ntBASIC22.52■■□□□ 1.2
PCDH18Q9HCL0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH18Q9HCL0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH18Q9HCL0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
PCDH18Q9HCL0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDH18Q9HCL0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH18Q9HCL0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH18Q9HCL0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDH18Q9HCL0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.51■■□□□ 1.19
PCDH18Q9HCL0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PCDH18Q9HCL0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PCDH18Q9HCL0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH18Q9HCL0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH18Q9HCL0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PCDH18Q9HCL0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH18Q9HCL0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDH18Q9HCL0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PCDH18Q9HCL0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH18Q9HCL0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH18Q9HCL0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH18Q9HCL0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH18Q9HCL0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDH18Q9HCL0 AC010141.3-201ENST00000456659 717 ntBASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms