Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD8Q9HCK8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CHD8Q9HCK8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CHD8Q9HCK8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.65■□□□□ 0.9
CHD8Q9HCK8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHD8Q9HCK8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.64■□□□□ 0.9
CHD8Q9HCK8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHD8Q9HCK8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.64■□□□□ 0.9
CHD8Q9HCK8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD8Q9HCK8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD8Q9HCK8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD8Q9HCK8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD8Q9HCK8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.64■□□□□ 0.89
CHD8Q9HCK8 AP003097.1-201ENST00000530657 1135 ntBASIC20.64■□□□□ 0.89
CHD8Q9HCK8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHD8Q9HCK8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHD8Q9HCK8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CHD8Q9HCK8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.64■□□□□ 0.89
CHD8Q9HCK8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CHD8Q9HCK8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CHD8Q9HCK8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CHD8Q9HCK8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.63■□□□□ 0.89
CHD8Q9HCK8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.63■□□□□ 0.89
CHD8Q9HCK8 AC097493.4-201ENST00000641197 219 ntBASIC20.63■□□□□ 0.89
CHD8Q9HCK8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD8Q9HCK8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD8Q9HCK8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHD8Q9HCK8 CYP2T1P-201ENST00000432607 1285 ntBASIC20.63■□□□□ 0.89
CHD8Q9HCK8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CHD8Q9HCK8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CHD8Q9HCK8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHD8Q9HCK8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.63■□□□□ 0.89
CHD8Q9HCK8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHD8Q9HCK8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD8Q9HCK8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CHD8Q9HCK8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD8Q9HCK8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD8Q9HCK8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.62■□□□□ 0.89
CHD8Q9HCK8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD8Q9HCK8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD8Q9HCK8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD8Q9HCK8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD8Q9HCK8 AC091874.3-201ENST00000512672 1195 ntBASIC20.62■□□□□ 0.89
CHD8Q9HCK8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.62■□□□□ 0.89
CHD8Q9HCK8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD8Q9HCK8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHD8Q9HCK8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD8Q9HCK8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.61■□□□□ 0.89
CHD8Q9HCK8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHD8Q9HCK8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD8Q9HCK8 AC068338.2-201ENST00000563278 1430 ntBASIC20.61■□□□□ 0.89
CHD8Q9HCK8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.61■□□□□ 0.89
CHD8Q9HCK8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD8Q9HCK8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD8Q9HCK8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.61■□□□□ 0.89
CHD8Q9HCK8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.61■□□□□ 0.89
CHD8Q9HCK8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CHD8Q9HCK8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CHD8Q9HCK8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.61■□□□□ 0.89
CHD8Q9HCK8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD8Q9HCK8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD8Q9HCK8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CHD8Q9HCK8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHD8Q9HCK8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CHD8Q9HCK8 RN7SL850P-201ENST00000579959 291 ntBASIC20.6■□□□□ 0.89
CHD8Q9HCK8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD8Q9HCK8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD8Q9HCK8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHD8Q9HCK8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD8Q9HCK8 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.6■□□□□ 0.89
CHD8Q9HCK8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.6■□□□□ 0.89
CHD8Q9HCK8 AC016405.3-201ENST00000607710 860 ntBASIC20.6■□□□□ 0.89
CHD8Q9HCK8 OR10C1-204ENST00000622521 1039 ntBASIC20.6■□□□□ 0.89
CHD8Q9HCK8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.6■□□□□ 0.89
CHD8Q9HCK8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD8Q9HCK8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHD8Q9HCK8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD8Q9HCK8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.59■□□□□ 0.89
CHD8Q9HCK8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD8Q9HCK8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.59■□□□□ 0.89
CHD8Q9HCK8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD8Q9HCK8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CHD8Q9HCK8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CHD8Q9HCK8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CHD8Q9HCK8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD8Q9HCK8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHD8Q9HCK8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD8Q9HCK8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD8Q9HCK8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CHD8Q9HCK8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.59■□□□□ 0.89
CHD8Q9HCK8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHD8Q9HCK8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHD8Q9HCK8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHD8Q9HCK8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHD8Q9HCK8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHD8Q9HCK8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHD8Q9HCK8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHD8Q9HCK8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.58■□□□□ 0.88
CHD8Q9HCK8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.58■□□□□ 0.88
CHD8Q9HCK8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms