Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH2D4AQ9H788 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SH2D4AQ9H788 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.44■■□□□ 1.66
SH2D4AQ9H788 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SH2D4AQ9H788 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH2D4AQ9H788 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SH2D4AQ9H788 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.44■■□□□ 1.66
SH2D4AQ9H788 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.44■■□□□ 1.66
SH2D4AQ9H788 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.44■■□□□ 1.66
SH2D4AQ9H788 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SH2D4AQ9H788 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.44■■□□□ 1.66
SH2D4AQ9H788 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.44■■□□□ 1.66
SH2D4AQ9H788 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH2D4AQ9H788 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.44■■□□□ 1.66
SH2D4AQ9H788 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH2D4AQ9H788 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.44■■□□□ 1.66
SH2D4AQ9H788 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC25.44■■□□□ 1.66
SH2D4AQ9H788 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
SH2D4AQ9H788 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
SH2D4AQ9H788 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.43■■□□□ 1.66
SH2D4AQ9H788 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.43■■□□□ 1.66
SH2D4AQ9H788 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SH2D4AQ9H788 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.43■■□□□ 1.66
SH2D4AQ9H788 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SH2D4AQ9H788 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.43■■□□□ 1.66
SH2D4AQ9H788 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SH2D4AQ9H788 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SH2D4AQ9H788 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
SH2D4AQ9H788 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.42■■□□□ 1.66
SH2D4AQ9H788 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.42■■□□□ 1.66
SH2D4AQ9H788 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.42■■□□□ 1.66
SH2D4AQ9H788 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.42■■□□□ 1.66
SH2D4AQ9H788 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.42■■□□□ 1.66
SH2D4AQ9H788 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SH2D4AQ9H788 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
SH2D4AQ9H788 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
SH2D4AQ9H788 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
SH2D4AQ9H788 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SH2D4AQ9H788 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.41■■□□□ 1.66
SH2D4AQ9H788 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SH2D4AQ9H788 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.41■■□□□ 1.66
SH2D4AQ9H788 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SH2D4AQ9H788 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.41■■□□□ 1.66
SH2D4AQ9H788 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.41■■□□□ 1.66
SH2D4AQ9H788 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.41■■□□□ 1.66
SH2D4AQ9H788 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.41■■□□□ 1.66
SH2D4AQ9H788 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SH2D4AQ9H788 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.41■■□□□ 1.66
SH2D4AQ9H788 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC25.41■■□□□ 1.66
SH2D4AQ9H788 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SH2D4AQ9H788 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SH2D4AQ9H788 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SH2D4AQ9H788 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SH2D4AQ9H788 AC137761.2-201ENST00000561729 223 ntBASIC25.4■■□□□ 1.66
SH2D4AQ9H788 AC145350.3-201ENST00000569033 163 ntBASIC25.4■■□□□ 1.66
SH2D4AQ9H788 KRT18P61-201ENST00000585825 1298 ntBASIC25.4■■□□□ 1.66
SH2D4AQ9H788 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
SH2D4AQ9H788 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
SH2D4AQ9H788 AP004607.4-201ENST00000530158 1459 ntBASIC25.4■■□□□ 1.66
SH2D4AQ9H788 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SH2D4AQ9H788 AC016769.1-201ENST00000409132 1010 ntBASIC25.39■■□□□ 1.66
SH2D4AQ9H788 AC079140.4-201ENST00000507448 529 ntBASIC25.39■■□□□ 1.66
SH2D4AQ9H788 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.39■■□□□ 1.66
SH2D4AQ9H788 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SH2D4AQ9H788 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25.39■■□□□ 1.65
SH2D4AQ9H788 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SH2D4AQ9H788 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SH2D4AQ9H788 AC004854.2-201ENST00000608450 1441 ntBASIC25.38■■□□□ 1.65
SH2D4AQ9H788 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.38■■□□□ 1.65
SH2D4AQ9H788 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SH2D4AQ9H788 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
SH2D4AQ9H788 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SH2D4AQ9H788 KRT19P1-201ENST00000405746 1186 ntBASIC25.38■■□□□ 1.65
SH2D4AQ9H788 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.38■■□□□ 1.65
SH2D4AQ9H788 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
SH2D4AQ9H788 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SH2D4AQ9H788 AC009237.3-201ENST00000393279 1427 ntBASIC25.37■■□□□ 1.65
SH2D4AQ9H788 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC25.37■■□□□ 1.65
SH2D4AQ9H788 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SH2D4AQ9H788 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.37■■□□□ 1.65
SH2D4AQ9H788 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SH2D4AQ9H788 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SH2D4AQ9H788 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC25.37■■□□□ 1.65
SH2D4AQ9H788 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SH2D4AQ9H788 AC006015.1-201ENST00000429970 570 ntBASIC25.37■■□□□ 1.65
SH2D4AQ9H788 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.37■■□□□ 1.65
SH2D4AQ9H788 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SH2D4AQ9H788 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SH2D4AQ9H788 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SH2D4AQ9H788 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SH2D4AQ9H788 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SH2D4AQ9H788 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.36■■□□□ 1.65
SH2D4AQ9H788 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SH2D4AQ9H788 LINC01960-201ENST00000563759 1884 ntBASIC25.36■■□□□ 1.65
SH2D4AQ9H788 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SH2D4AQ9H788 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SH2D4AQ9H788 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SH2D4AQ9H788 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SH2D4AQ9H788 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SH2D4AQ9H788 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms