Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SOX17Q9H6I2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOX17Q9H6I2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.03■□□□□ 0.96
SOX17Q9H6I2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SOX17Q9H6I2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SOX17Q9H6I2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.03■□□□□ 0.96
SOX17Q9H6I2 RASA4CP-201ENST00000424092 1398 ntBASIC21.03■□□□□ 0.96
SOX17Q9H6I2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOX17Q9H6I2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SOX17Q9H6I2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.03■□□□□ 0.96
SOX17Q9H6I2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.03■□□□□ 0.96
SOX17Q9H6I2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.03■□□□□ 0.96
SOX17Q9H6I2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOX17Q9H6I2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOX17Q9H6I2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOX17Q9H6I2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SOX17Q9H6I2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SOX17Q9H6I2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOX17Q9H6I2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOX17Q9H6I2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SOX17Q9H6I2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SOX17Q9H6I2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SOX17Q9H6I2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOX17Q9H6I2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.02■□□□□ 0.96
SOX17Q9H6I2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOX17Q9H6I2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOX17Q9H6I2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOX17Q9H6I2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOX17Q9H6I2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SOX17Q9H6I2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.02■□□□□ 0.95
SOX17Q9H6I2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.02■□□□□ 0.95
SOX17Q9H6I2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.02■□□□□ 0.95
SOX17Q9H6I2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
SOX17Q9H6I2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
SOX17Q9H6I2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SOX17Q9H6I2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOX17Q9H6I2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOX17Q9H6I2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOX17Q9H6I2 AC144652.1-201ENST00000609974 1624 ntBASIC21.01■□□□□ 0.95
SOX17Q9H6I2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SOX17Q9H6I2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.01■□□□□ 0.95
SOX17Q9H6I2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SOX17Q9H6I2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SOX17Q9H6I2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOX17Q9H6I2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SOX17Q9H6I2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.01■□□□□ 0.95
SOX17Q9H6I2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SOX17Q9H6I2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SOX17Q9H6I2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21■□□□□ 0.95
SOX17Q9H6I2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SOX17Q9H6I2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21■□□□□ 0.95
SOX17Q9H6I2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SOX17Q9H6I2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21■□□□□ 0.95
SOX17Q9H6I2 AC233992.3-201ENST00000607491 485 ntBASIC21■□□□□ 0.95
SOX17Q9H6I2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21■□□□□ 0.95
SOX17Q9H6I2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SOX17Q9H6I2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SOX17Q9H6I2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
SOX17Q9H6I2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.99■□□□□ 0.95
SOX17Q9H6I2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
SOX17Q9H6I2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SOX17Q9H6I2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SOX17Q9H6I2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SOX17Q9H6I2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SOX17Q9H6I2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SOX17Q9H6I2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SOX17Q9H6I2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SOX17Q9H6I2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SOX17Q9H6I2 AC133637.1-201ENST00000624115 1537 ntBASIC20.99■□□□□ 0.95
SOX17Q9H6I2 FP325331.1-202ENST00000623531 1380 ntBASIC20.98■□□□□ 0.95
SOX17Q9H6I2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SOX17Q9H6I2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.98■□□□□ 0.95
SOX17Q9H6I2 BX842568.3-201ENST00000418104 571 ntBASIC20.98■□□□□ 0.95
SOX17Q9H6I2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SOX17Q9H6I2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SOX17Q9H6I2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.98■□□□□ 0.95
SOX17Q9H6I2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.98■□□□□ 0.95
SOX17Q9H6I2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SOX17Q9H6I2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX17Q9H6I2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX17Q9H6I2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX17Q9H6I2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.97■□□□□ 0.95
SOX17Q9H6I2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SOX17Q9H6I2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX17Q9H6I2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SOX17Q9H6I2 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.97■□□□□ 0.95
SOX17Q9H6I2 DUX4L4-201ENST00000566884 1269 ntBASIC20.97■□□□□ 0.95
SOX17Q9H6I2 LINC01529-204ENST00000636474 1715 ntBASIC20.97■□□□□ 0.95
SOX17Q9H6I2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.97■□□□□ 0.95
SOX17Q9H6I2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.97■□□□□ 0.95
SOX17Q9H6I2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SOX17Q9H6I2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SOX17Q9H6I2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.96■□□□□ 0.95
SOX17Q9H6I2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SOX17Q9H6I2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms