Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NELFAQ9H3P2 AC242852.2-201ENST00000615738 1807 ntBASIC19.35■□□□□ 0.69
NELFAQ9H3P2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 SLC47A1P1-202ENST00000449666 945 ntBASIC19.34■□□□□ 0.69
NELFAQ9H3P2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 AC005837.3-201ENST00000612163 286 ntBASIC19.34■□□□□ 0.69
NELFAQ9H3P2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NELFAQ9H3P2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
NELFAQ9H3P2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NELFAQ9H3P2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NELFAQ9H3P2 MIR939-201ENST00000401314 82 ntBASIC19.33■□□□□ 0.68
NELFAQ9H3P2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NELFAQ9H3P2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NELFAQ9H3P2 AL355001.2-201ENST00000620617 1191 ntBASIC19.33■□□□□ 0.68
NELFAQ9H3P2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.33■□□□□ 0.68
NELFAQ9H3P2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NELFAQ9H3P2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
NELFAQ9H3P2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NELFAQ9H3P2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NELFAQ9H3P2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NELFAQ9H3P2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NELFAQ9H3P2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.32■□□□□ 0.68
NELFAQ9H3P2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.32■□□□□ 0.68
NELFAQ9H3P2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.32■□□□□ 0.68
NELFAQ9H3P2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NELFAQ9H3P2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
NELFAQ9H3P2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NELFAQ9H3P2 BX842568.3-201ENST00000418104 571 ntBASIC19.32■□□□□ 0.68
NELFAQ9H3P2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.32■□□□□ 0.68
NELFAQ9H3P2 AF213884.3-201ENST00000563833 479 ntBASIC19.32■□□□□ 0.68
NELFAQ9H3P2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NELFAQ9H3P2 CLDN5-201ENST00000403084 2357 ntBASIC19.32■□□□□ 0.68
NELFAQ9H3P2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NELFAQ9H3P2 ECEL1P1-201ENST00000373592 1742 ntBASIC19.31■□□□□ 0.68
NELFAQ9H3P2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NELFAQ9H3P2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NELFAQ9H3P2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.31■□□□□ 0.68
NELFAQ9H3P2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NELFAQ9H3P2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.31■□□□□ 0.68
NELFAQ9H3P2 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.31■□□□□ 0.68
NELFAQ9H3P2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NELFAQ9H3P2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NELFAQ9H3P2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NELFAQ9H3P2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NELFAQ9H3P2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NELFAQ9H3P2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NELFAQ9H3P2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NELFAQ9H3P2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NELFAQ9H3P2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.3■□□□□ 0.68
NELFAQ9H3P2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.3■□□□□ 0.68
NELFAQ9H3P2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.3■□□□□ 0.68
NELFAQ9H3P2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NELFAQ9H3P2 AL136967.2-201ENST00000623968 743 ntBASIC19.3■□□□□ 0.68
NELFAQ9H3P2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NELFAQ9H3P2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NELFAQ9H3P2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NELFAQ9H3P2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NELFAQ9H3P2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
NELFAQ9H3P2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
NELFAQ9H3P2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NELFAQ9H3P2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NELFAQ9H3P2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NELFAQ9H3P2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NELFAQ9H3P2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NELFAQ9H3P2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NELFAQ9H3P2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NELFAQ9H3P2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
NELFAQ9H3P2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NELFAQ9H3P2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NELFAQ9H3P2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NELFAQ9H3P2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NELFAQ9H3P2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NELFAQ9H3P2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.28■□□□□ 0.68
NELFAQ9H3P2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NELFAQ9H3P2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
NELFAQ9H3P2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.28■□□□□ 0.68
NELFAQ9H3P2 AC027682.1-201ENST00000562846 899 ntBASIC19.28■□□□□ 0.68
NELFAQ9H3P2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NELFAQ9H3P2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NELFAQ9H3P2 AC008764.7-201ENST00000593779 1081 ntBASIC19.28■□□□□ 0.68
NELFAQ9H3P2 AC233992.3-201ENST00000607491 485 ntBASIC19.28■□□□□ 0.68
NELFAQ9H3P2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NELFAQ9H3P2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms