Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.2■■□□□ 1.3
SNX25Q9H3E2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.2■■□□□ 1.3
SNX25Q9H3E2 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.2■■□□□ 1.3
SNX25Q9H3E2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
SNX25Q9H3E2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.2■■□□□ 1.3
SNX25Q9H3E2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SNX25Q9H3E2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SNX25Q9H3E2 AC087742.1-201ENST00000575880 1738 ntBASIC23.19■■□□□ 1.3
SNX25Q9H3E2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SNX25Q9H3E2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
SNX25Q9H3E2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SNX25Q9H3E2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
SNX25Q9H3E2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.19■■□□□ 1.3
SNX25Q9H3E2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SNX25Q9H3E2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SNX25Q9H3E2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SNX25Q9H3E2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.19■■□□□ 1.3
SNX25Q9H3E2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.19■■□□□ 1.3
SNX25Q9H3E2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SNX25Q9H3E2 AC079089.2-201ENST00000531211 1277 ntBASIC23.19■■□□□ 1.3
SNX25Q9H3E2 RARRES2P6-201ENST00000567333 442 ntBASIC23.19■■□□□ 1.3
SNX25Q9H3E2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.19■■□□□ 1.3
SNX25Q9H3E2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SNX25Q9H3E2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SNX25Q9H3E2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.19■■□□□ 1.3
SNX25Q9H3E2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.19■■□□□ 1.3
SNX25Q9H3E2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
SNX25Q9H3E2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SNX25Q9H3E2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SNX25Q9H3E2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SNX25Q9H3E2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SNX25Q9H3E2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SNX25Q9H3E2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SNX25Q9H3E2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.18■■□□□ 1.3
SNX25Q9H3E2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.18■■□□□ 1.3
SNX25Q9H3E2 SMUG1P1-201ENST00000590640 811 ntBASIC23.18■■□□□ 1.3
SNX25Q9H3E2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SNX25Q9H3E2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.18■■□□□ 1.3
SNX25Q9H3E2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
SNX25Q9H3E2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.18■■□□□ 1.3
SNX25Q9H3E2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SNX25Q9H3E2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SNX25Q9H3E2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SNX25Q9H3E2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNX25Q9H3E2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SNX25Q9H3E2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNX25Q9H3E2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.17■■□□□ 1.3
SNX25Q9H3E2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.17■■□□□ 1.3
SNX25Q9H3E2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SNX25Q9H3E2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SNX25Q9H3E2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SNX25Q9H3E2 C1orf229-201ENST00000623686 2258 ntBASIC23.17■■□□□ 1.3
SNX25Q9H3E2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.17■■□□□ 1.3
SNX25Q9H3E2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SNX25Q9H3E2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNX25Q9H3E2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNX25Q9H3E2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.16■■□□□ 1.3
SNX25Q9H3E2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNX25Q9H3E2 AC027612.3-201ENST00000413684 1047 ntBASIC23.16■■□□□ 1.3
SNX25Q9H3E2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.16■■□□□ 1.3
SNX25Q9H3E2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.16■■□□□ 1.3
SNX25Q9H3E2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNX25Q9H3E2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNX25Q9H3E2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SNX25Q9H3E2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNX25Q9H3E2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SNX25Q9H3E2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNX25Q9H3E2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNX25Q9H3E2 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.15■■□□□ 1.3
SNX25Q9H3E2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SNX25Q9H3E2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNX25Q9H3E2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.15■■□□□ 1.3
SNX25Q9H3E2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.15■■□□□ 1.3
SNX25Q9H3E2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.15■■□□□ 1.3
SNX25Q9H3E2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SNX25Q9H3E2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
SNX25Q9H3E2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNX25Q9H3E2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SNX25Q9H3E2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNX25Q9H3E2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.14■■□□□ 1.3
SNX25Q9H3E2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SNX25Q9H3E2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.3
SNX25Q9H3E2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SNX25Q9H3E2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
SNX25Q9H3E2 AC026271.2-201ENST00000428091 497 ntBASIC23.14■■□□□ 1.29
SNX25Q9H3E2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.14■■□□□ 1.29
SNX25Q9H3E2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SNX25Q9H3E2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SNX25Q9H3E2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SNX25Q9H3E2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
SNX25Q9H3E2 ESRRAP2-201ENST00000418437 1549 ntBASIC23.13■■□□□ 1.29
SNX25Q9H3E2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SNX25Q9H3E2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SNX25Q9H3E2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SNX25Q9H3E2 AC097381.1-201ENST00000429019 1296 ntBASIC23.13■■□□□ 1.29
SNX25Q9H3E2 YBX1P1-201ENST00000445822 960 ntBASIC23.13■■□□□ 1.29
SNX25Q9H3E2 MIR6821-201ENST00000617625 74 ntBASIC23.13■■□□□ 1.29
SNX25Q9H3E2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SNX25Q9H3E2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
SNX25Q9H3E2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms