Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.44■■□□□ 1.34
CDH23Q9H251 AC010331.1-201ENST00000611423 582 ntBASIC23.44■■□□□ 1.34
CDH23Q9H251 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDH23Q9H251 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
CDH23Q9H251 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CDH23Q9H251 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
CDH23Q9H251 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDH23Q9H251 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.44■■□□□ 1.34
CDH23Q9H251 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.44■■□□□ 1.34
CDH23Q9H251 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDH23Q9H251 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CDH23Q9H251 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CDH23Q9H251 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.43■■□□□ 1.34
CDH23Q9H251 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
CDH23Q9H251 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CDH23Q9H251 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CDH23Q9H251 AC079140.4-201ENST00000507448 529 ntBASIC23.43■■□□□ 1.34
CDH23Q9H251 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.43■■□□□ 1.34
CDH23Q9H251 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.43■■□□□ 1.34
CDH23Q9H251 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
CDH23Q9H251 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CDH23Q9H251 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CDH23Q9H251 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CDH23Q9H251 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
CDH23Q9H251 MIR1224-201ENST00000408193 85 ntBASIC23.42■■□□□ 1.34
CDH23Q9H251 AL158047.1-201ENST00000445918 881 ntBASIC23.42■■□□□ 1.34
CDH23Q9H251 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.42■■□□□ 1.34
CDH23Q9H251 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CDH23Q9H251 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
CDH23Q9H251 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
CDH23Q9H251 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.42■■□□□ 1.34
CDH23Q9H251 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.42■■□□□ 1.34
CDH23Q9H251 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.42■■□□□ 1.34
CDH23Q9H251 MKRN4P-201ENST00000444706 1521 ntBASIC23.42■■□□□ 1.34
CDH23Q9H251 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CDH23Q9H251 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CDH23Q9H251 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.41■■□□□ 1.34
CDH23Q9H251 FAM210CP-201ENST00000445714 574 ntBASIC23.41■■□□□ 1.34
CDH23Q9H251 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.41■■□□□ 1.34
CDH23Q9H251 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDH23Q9H251 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDH23Q9H251 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
CDH23Q9H251 DUSP8P5-201ENST00000422884 1815 ntBASIC23.41■■□□□ 1.34
CDH23Q9H251 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDH23Q9H251 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CDH23Q9H251 RPS2P4-201ENST00000476944 856 ntBASIC23.4■■□□□ 1.34
CDH23Q9H251 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDH23Q9H251 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
CDH23Q9H251 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CDH23Q9H251 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDH23Q9H251 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.4■■□□□ 1.34
CDH23Q9H251 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.4■■□□□ 1.34
CDH23Q9H251 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.4■■□□□ 1.34
CDH23Q9H251 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CDH23Q9H251 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.4■■□□□ 1.34
CDH23Q9H251 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
CDH23Q9H251 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.39■■□□□ 1.34
CDH23Q9H251 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CDH23Q9H251 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
CDH23Q9H251 LINC01529-204ENST00000636474 1715 ntBASIC23.39■■□□□ 1.34
CDH23Q9H251 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDH23Q9H251 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.39■■□□□ 1.33
CDH23Q9H251 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.39■■□□□ 1.33
CDH23Q9H251 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDH23Q9H251 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.39■■□□□ 1.33
CDH23Q9H251 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CDH23Q9H251 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
CDH23Q9H251 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDH23Q9H251 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.38■■□□□ 1.33
CDH23Q9H251 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CDH23Q9H251 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDH23Q9H251 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
CDH23Q9H251 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDH23Q9H251 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.38■■□□□ 1.33
CDH23Q9H251 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.38■■□□□ 1.33
CDH23Q9H251 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.38■■□□□ 1.33
CDH23Q9H251 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDH23Q9H251 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
CDH23Q9H251 MYC-209ENST00000641252 345 ntBASIC23.38■■□□□ 1.33
CDH23Q9H251 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
CDH23Q9H251 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDH23Q9H251 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.38■■□□□ 1.33
CDH23Q9H251 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.38■■□□□ 1.33
CDH23Q9H251 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDH23Q9H251 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDH23Q9H251 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDH23Q9H251 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDH23Q9H251 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDH23Q9H251 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.37■■□□□ 1.33
CDH23Q9H251 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDH23Q9H251 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDH23Q9H251 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDH23Q9H251 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CDH23Q9H251 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDH23Q9H251 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDH23Q9H251 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDH23Q9H251 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDH23Q9H251 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDH23Q9H251 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDH23Q9H251 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms