Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
NUCKS1Q9H1E3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NUCKS1Q9H1E3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.57■■□□□ 1.36
NUCKS1Q9H1E3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
NUCKS1Q9H1E3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NUCKS1Q9H1E3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NUCKS1Q9H1E3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NUCKS1Q9H1E3 AL512631.2-201ENST00000604634 923 ntBASIC23.57■■□□□ 1.36
NUCKS1Q9H1E3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
NUCKS1Q9H1E3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NUCKS1Q9H1E3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
NUCKS1Q9H1E3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NUCKS1Q9H1E3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NUCKS1Q9H1E3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
NUCKS1Q9H1E3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NUCKS1Q9H1E3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
NUCKS1Q9H1E3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
NUCKS1Q9H1E3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
NUCKS1Q9H1E3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.56■■□□□ 1.36
NUCKS1Q9H1E3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
NUCKS1Q9H1E3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NUCKS1Q9H1E3 MIR4466-201ENST00000606121 54 ntBASIC23.56■■□□□ 1.36
NUCKS1Q9H1E3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.56■■□□□ 1.36
NUCKS1Q9H1E3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
NUCKS1Q9H1E3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
NUCKS1Q9H1E3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
NUCKS1Q9H1E3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
NUCKS1Q9H1E3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
NUCKS1Q9H1E3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NUCKS1Q9H1E3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NUCKS1Q9H1E3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
NUCKS1Q9H1E3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
NUCKS1Q9H1E3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
NUCKS1Q9H1E3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NUCKS1Q9H1E3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NUCKS1Q9H1E3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NUCKS1Q9H1E3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NUCKS1Q9H1E3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NUCKS1Q9H1E3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
NUCKS1Q9H1E3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NUCKS1Q9H1E3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NUCKS1Q9H1E3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NUCKS1Q9H1E3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.53■■□□□ 1.36
NUCKS1Q9H1E3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NUCKS1Q9H1E3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NUCKS1Q9H1E3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NUCKS1Q9H1E3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NUCKS1Q9H1E3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
NUCKS1Q9H1E3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NUCKS1Q9H1E3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NUCKS1Q9H1E3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NUCKS1Q9H1E3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NUCKS1Q9H1E3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
NUCKS1Q9H1E3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NUCKS1Q9H1E3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NUCKS1Q9H1E3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NUCKS1Q9H1E3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NUCKS1Q9H1E3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NUCKS1Q9H1E3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NUCKS1Q9H1E3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NUCKS1Q9H1E3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NUCKS1Q9H1E3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NUCKS1Q9H1E3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
NUCKS1Q9H1E3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NUCKS1Q9H1E3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.52■■□□□ 1.36
NUCKS1Q9H1E3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
NUCKS1Q9H1E3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.52■■□□□ 1.36
NUCKS1Q9H1E3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NUCKS1Q9H1E3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
NUCKS1Q9H1E3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.52■■□□□ 1.36
NUCKS1Q9H1E3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.52■■□□□ 1.36
NUCKS1Q9H1E3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.52■■□□□ 1.36
NUCKS1Q9H1E3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
NUCKS1Q9H1E3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NUCKS1Q9H1E3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NUCKS1Q9H1E3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NUCKS1Q9H1E3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NUCKS1Q9H1E3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.51■■□□□ 1.35
NUCKS1Q9H1E3 AL136116.3-201ENST00000402907 1138 ntBASIC23.51■■□□□ 1.35
NUCKS1Q9H1E3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NUCKS1Q9H1E3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NUCKS1Q9H1E3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NUCKS1Q9H1E3 AC010542.4-201ENST00000563151 1910 ntBASIC23.51■■□□□ 1.35
NUCKS1Q9H1E3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NUCKS1Q9H1E3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NUCKS1Q9H1E3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NUCKS1Q9H1E3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.5■■□□□ 1.35
NUCKS1Q9H1E3 AC241377.3-202ENST00000626088 1088 ntBASIC23.5■■□□□ 1.35
NUCKS1Q9H1E3 AC241585.3-202ENST00000628937 1088 ntBASIC23.5■■□□□ 1.35
NUCKS1Q9H1E3 AC245100.8-202ENST00000629247 1058 ntBASIC23.5■■□□□ 1.35
NUCKS1Q9H1E3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.5■■□□□ 1.35
NUCKS1Q9H1E3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NUCKS1Q9H1E3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.5■■□□□ 1.35
NUCKS1Q9H1E3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NUCKS1Q9H1E3 PKD1P6-201ENST00000343738 4769 ntBASIC23.49■■□□□ 1.35
NUCKS1Q9H1E3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NUCKS1Q9H1E3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.49■■□□□ 1.35
NUCKS1Q9H1E3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
NUCKS1Q9H1E3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.49■■□□□ 1.35
NUCKS1Q9H1E3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms