Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CNTNAP3Q9BZ76 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.83■□□□□ 0.93
CNTNAP3Q9BZ76 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CNTNAP3Q9BZ76 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
CNTNAP3Q9BZ76 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
CNTNAP3Q9BZ76 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
CNTNAP3Q9BZ76 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.83■□□□□ 0.92
CNTNAP3Q9BZ76 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.83■□□□□ 0.92
CNTNAP3Q9BZ76 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 AC104187.1-201ENST00000607510 612 ntBASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 MYCNOS-205ENST00000641950 531 ntBASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CNTNAP3Q9BZ76 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 AL022069.1-201ENST00000568025 1636 ntBASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNTNAP3Q9BZ76 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNTNAP3Q9BZ76 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNTNAP3Q9BZ76 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CNTNAP3Q9BZ76 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNTNAP3Q9BZ76 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNTNAP3Q9BZ76 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.8■□□□□ 0.92
CNTNAP3Q9BZ76 BX088651.1-201ENST00000540551 451 ntBASIC20.8■□□□□ 0.92
CNTNAP3Q9BZ76 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.8■□□□□ 0.92
CNTNAP3Q9BZ76 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.8■□□□□ 0.92
CNTNAP3Q9BZ76 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.8■□□□□ 0.92
CNTNAP3Q9BZ76 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.8■□□□□ 0.92
CNTNAP3Q9BZ76 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.8■□□□□ 0.92
CNTNAP3Q9BZ76 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNTNAP3Q9BZ76 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CNTNAP3Q9BZ76 RCN1P1-201ENST00000400413 996 ntBASIC20.79■□□□□ 0.92
CNTNAP3Q9BZ76 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.79■□□□□ 0.92
CNTNAP3Q9BZ76 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.79■□□□□ 0.92
CNTNAP3Q9BZ76 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CNTNAP3Q9BZ76 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.79■□□□□ 0.92
CNTNAP3Q9BZ76 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.79■□□□□ 0.92
CNTNAP3Q9BZ76 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CNTNAP3Q9BZ76 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CNTNAP3Q9BZ76 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
CNTNAP3Q9BZ76 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CNTNAP3Q9BZ76 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNTNAP3Q9BZ76 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP3Q9BZ76 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CNTNAP3Q9BZ76 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.78■□□□□ 0.92
CNTNAP3Q9BZ76 AC020928.2-201ENST00000588717 2197 ntBASIC20.78■□□□□ 0.92
CNTNAP3Q9BZ76 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP3Q9BZ76 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP3Q9BZ76 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP3Q9BZ76 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.78■□□□□ 0.92
CNTNAP3Q9BZ76 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CNTNAP3Q9BZ76 AC026366.1-201ENST00000488803 879 ntBASIC20.78■□□□□ 0.92
CNTNAP3Q9BZ76 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CNTNAP3Q9BZ76 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.78■□□□□ 0.92
CNTNAP3Q9BZ76 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CNTNAP3Q9BZ76 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CNTNAP3Q9BZ76 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNTNAP3Q9BZ76 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.78■□□□□ 0.92
CNTNAP3Q9BZ76 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3Q9BZ76 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3Q9BZ76 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3Q9BZ76 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3Q9BZ76 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNTNAP3Q9BZ76 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms