Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VRK1Q99986 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VRK1Q99986 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.06■□□□□ 0.64
VRK1Q99986 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.06■□□□□ 0.64
VRK1Q99986 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VRK1Q99986 SLC25A24-204ENST00000569674 2357 ntBASIC19.06■□□□□ 0.64
VRK1Q99986 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
VRK1Q99986 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VRK1Q99986 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.06■□□□□ 0.64
VRK1Q99986 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.06■□□□□ 0.64
VRK1Q99986 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VRK1Q99986 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VRK1Q99986 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VRK1Q99986 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VRK1Q99986 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.05■□□□□ 0.64
VRK1Q99986 GUSBP5-202ENST00000510805 1989 ntBASIC19.05■□□□□ 0.64
VRK1Q99986 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.05■□□□□ 0.64
VRK1Q99986 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VRK1Q99986 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VRK1Q99986 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.05■□□□□ 0.64
VRK1Q99986 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VRK1Q99986 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.05■□□□□ 0.64
VRK1Q99986 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.05■□□□□ 0.64
VRK1Q99986 AC233992.3-201ENST00000607491 485 ntBASIC19.05■□□□□ 0.64
VRK1Q99986 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
VRK1Q99986 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.05■□□□□ 0.64
VRK1Q99986 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
VRK1Q99986 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VRK1Q99986 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VRK1Q99986 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VRK1Q99986 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
VRK1Q99986 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
VRK1Q99986 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
VRK1Q99986 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VRK1Q99986 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
VRK1Q99986 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VRK1Q99986 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
VRK1Q99986 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.04■□□□□ 0.64
VRK1Q99986 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VRK1Q99986 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VRK1Q99986 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.04■□□□□ 0.64
VRK1Q99986 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VRK1Q99986 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VRK1Q99986 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 BX842568.3-201ENST00000418104 571 ntBASIC19.03■□□□□ 0.64
VRK1Q99986 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.03■□□□□ 0.64
VRK1Q99986 RARRES2P6-201ENST00000567333 442 ntBASIC19.03■□□□□ 0.64
VRK1Q99986 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.03■□□□□ 0.64
VRK1Q99986 AC126544.1-201ENST00000580842 1059 ntBASIC19.03■□□□□ 0.64
VRK1Q99986 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.03■□□□□ 0.64
VRK1Q99986 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.03■□□□□ 0.64
VRK1Q99986 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.03■□□□□ 0.64
VRK1Q99986 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.03■□□□□ 0.64
VRK1Q99986 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
VRK1Q99986 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VRK1Q99986 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.03■□□□□ 0.64
VRK1Q99986 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VRK1Q99986 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VRK1Q99986 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VRK1Q99986 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VRK1Q99986 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VRK1Q99986 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VRK1Q99986 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
VRK1Q99986 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VRK1Q99986 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VRK1Q99986 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.02■□□□□ 0.64
VRK1Q99986 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
VRK1Q99986 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VRK1Q99986 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VRK1Q99986 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VRK1Q99986 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
VRK1Q99986 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
VRK1Q99986 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VRK1Q99986 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VRK1Q99986 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.01■□□□□ 0.63
VRK1Q99986 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.01■□□□□ 0.63
VRK1Q99986 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
VRK1Q99986 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.01■□□□□ 0.63
VRK1Q99986 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
VRK1Q99986 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK1Q99986 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VRK1Q99986 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
VRK1Q99986 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms