Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE1Q99829 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.75■■□□□ 1.07
CPNE1Q99829 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.75■■□□□ 1.07
CPNE1Q99829 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE1Q99829 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE1Q99829 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE1Q99829 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE1Q99829 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE1Q99829 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CPNE1Q99829 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE1Q99829 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE1Q99829 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
CPNE1Q99829 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CPNE1Q99829 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE1Q99829 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE1Q99829 AL137060.1-201ENST00000618151 2648 ntBASIC21.74■■□□□ 1.07
CPNE1Q99829 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE1Q99829 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CPNE1Q99829 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CPNE1Q99829 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CPNE1Q99829 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.73■■□□□ 1.07
CPNE1Q99829 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.73■■□□□ 1.07
CPNE1Q99829 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.73■■□□□ 1.07
CPNE1Q99829 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.73■■□□□ 1.07
CPNE1Q99829 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CPNE1Q99829 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE1Q99829 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CPNE1Q99829 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE1Q99829 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.72■■□□□ 1.07
CPNE1Q99829 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE1Q99829 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE1Q99829 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE1Q99829 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE1Q99829 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE1Q99829 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE1Q99829 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CPNE1Q99829 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE1Q99829 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE1Q99829 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.72■■□□□ 1.07
CPNE1Q99829 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE1Q99829 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.72■■□□□ 1.07
CPNE1Q99829 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE1Q99829 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE1Q99829 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE1Q99829 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE1Q99829 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.71■■□□□ 1.07
CPNE1Q99829 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE1Q99829 AL031602.1-201ENST00000633169 911 ntBASIC21.71■■□□□ 1.07
CPNE1Q99829 AC026310.3-201ENST00000625186 2373 ntBASIC21.71■■□□□ 1.07
CPNE1Q99829 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.71■■□□□ 1.07
CPNE1Q99829 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE1Q99829 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CPNE1Q99829 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE1Q99829 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPNE1Q99829 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CPNE1Q99829 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.7■■□□□ 1.07
CPNE1Q99829 AC133637.1-201ENST00000624115 1537 ntBASIC21.7■■□□□ 1.07
CPNE1Q99829 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE1Q99829 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE1Q99829 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
CPNE1Q99829 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE1Q99829 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.7■■□□□ 1.06
CPNE1Q99829 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE1Q99829 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.7■■□□□ 1.06
CPNE1Q99829 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.7■■□□□ 1.06
CPNE1Q99829 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPNE1Q99829 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.7■■□□□ 1.06
CPNE1Q99829 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE1Q99829 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE1Q99829 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE1Q99829 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.69■■□□□ 1.06
CPNE1Q99829 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE1Q99829 KRT16P3-201ENST00000439127 1283 ntBASIC21.69■■□□□ 1.06
CPNE1Q99829 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE1Q99829 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
CPNE1Q99829 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.69■■□□□ 1.06
CPNE1Q99829 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPNE1Q99829 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE1Q99829 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.68■■□□□ 1.06
CPNE1Q99829 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.68■■□□□ 1.06
CPNE1Q99829 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE1Q99829 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE1Q99829 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.68■■□□□ 1.06
CPNE1Q99829 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.68■■□□□ 1.06
CPNE1Q99829 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.68■■□□□ 1.06
CPNE1Q99829 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE1Q99829 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE1Q99829 PKD1P6-201ENST00000343738 4769 ntBASIC21.68■■□□□ 1.06
CPNE1Q99829 AC244015.2-201ENST00000616358 1861 ntBASIC21.68■■□□□ 1.06
CPNE1Q99829 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE1Q99829 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPNE1Q99829 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPNE1Q99829 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.67■■□□□ 1.06
CPNE1Q99829 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CPNE1Q99829 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPNE1Q99829 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPNE1Q99829 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CPNE1Q99829 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPNE1Q99829 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.67■■□□□ 1.06
CPNE1Q99829 pRNA.6-201ENST00000610482 90 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms