Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRGV9Q99603 AC244015.2-201ENST00000616358 1861 ntBASIC16.95■□□□□ 0.3
TRGV9Q99603 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRGV9Q99603 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV9Q99603 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TRGV9Q99603 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.94■□□□□ 0.3
TRGV9Q99603 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV9Q99603 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV9Q99603 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV9Q99603 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV9Q99603 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.94■□□□□ 0.3
TRGV9Q99603 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV9Q99603 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV9Q99603 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV9Q99603 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV9Q99603 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV9Q99603 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV9Q99603 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV9Q99603 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV9Q99603 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV9Q99603 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV9Q99603 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRGV9Q99603 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.94■□□□□ 0.3
TRGV9Q99603 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRGV9Q99603 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.93■□□□□ 0.3
TRGV9Q99603 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRGV9Q99603 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRGV9Q99603 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRGV9Q99603 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.93■□□□□ 0.3
TRGV9Q99603 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.93■□□□□ 0.3
TRGV9Q99603 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
TRGV9Q99603 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRGV9Q99603 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRGV9Q99603 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.93■□□□□ 0.3
TRGV9Q99603 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRGV9Q99603 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRGV9Q99603 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRGV9Q99603 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.93■□□□□ 0.3
TRGV9Q99603 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRGV9Q99603 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.92■□□□□ 0.3
TRGV9Q99603 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRGV9Q99603 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRGV9Q99603 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRGV9Q99603 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRGV9Q99603 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.92■□□□□ 0.3
TRGV9Q99603 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRGV9Q99603 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRGV9Q99603 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRGV9Q99603 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRGV9Q99603 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
TRGV9Q99603 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRGV9Q99603 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRGV9Q99603 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRGV9Q99603 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.92■□□□□ 0.3
TRGV9Q99603 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV9Q99603 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.91■□□□□ 0.3
TRGV9Q99603 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV9Q99603 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV9Q99603 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV9Q99603 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.91■□□□□ 0.3
TRGV9Q99603 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.91■□□□□ 0.3
TRGV9Q99603 TSPY9P-201ENST00000440215 945 ntBASIC16.91■□□□□ 0.3
TRGV9Q99603 TSPY11P-201ENST00000442607 1045 ntBASIC16.91■□□□□ 0.3
TRGV9Q99603 AC239859.2-201ENST00000444165 318 ntBASIC16.91■□□□□ 0.3
TRGV9Q99603 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.91■□□□□ 0.3
TRGV9Q99603 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.91■□□□□ 0.3
TRGV9Q99603 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
TRGV9Q99603 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.91■□□□□ 0.3
TRGV9Q99603 AC241377.3-202ENST00000626088 1088 ntBASIC16.91■□□□□ 0.3
TRGV9Q99603 AC241585.3-202ENST00000628937 1088 ntBASIC16.91■□□□□ 0.3
TRGV9Q99603 AC245100.8-202ENST00000629247 1058 ntBASIC16.91■□□□□ 0.3
TRGV9Q99603 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TRGV9Q99603 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV9Q99603 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV9Q99603 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV9Q99603 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV9Q99603 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRGV9Q99603 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.91■□□□□ 0.3
TRGV9Q99603 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV9Q99603 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV9Q99603 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRGV9Q99603 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV9Q99603 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
TRGV9Q99603 AL117332.1-201ENST00000622628 974 ntBASIC16.9■□□□□ 0.3
TRGV9Q99603 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV9Q99603 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV9Q99603 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV9Q99603 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
TRGV9Q99603 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV9Q99603 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRGV9Q99603 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
TRGV9Q99603 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV9Q99603 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV9Q99603 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV9Q99603 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV9Q99603 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRGV9Q99603 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV9Q99603 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV9Q99603 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRGV9Q99603 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms