Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.37■□□□□ 0.21
AP1S3Q96PC3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S3Q96PC3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.37■□□□□ 0.21
AP1S3Q96PC3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S3Q96PC3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.37■□□□□ 0.21
AP1S3Q96PC3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
AP1S3Q96PC3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
AP1S3Q96PC3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S3Q96PC3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.37■□□□□ 0.21
AP1S3Q96PC3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S3Q96PC3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S3Q96PC3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S3Q96PC3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP1S3Q96PC3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 AC011551.1-201ENST00000614101 683 ntBASIC16.36■□□□□ 0.21
AP1S3Q96PC3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 PKD1P5-201ENST00000532415 10291 ntBASIC16.36■□□□□ 0.21
AP1S3Q96PC3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S3Q96PC3 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.36■□□□□ 0.21
AP1S3Q96PC3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 MIR6765-201ENST00000614092 87 ntBASIC16.35■□□□□ 0.21
AP1S3Q96PC3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
AP1S3Q96PC3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S3Q96PC3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
AP1S3Q96PC3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.34■□□□□ 0.21
AP1S3Q96PC3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.34■□□□□ 0.21
AP1S3Q96PC3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S3Q96PC3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S3Q96PC3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S3Q96PC3 PKD1P1-201ENST00000458669 6805 ntBASIC16.34■□□□□ 0.21
AP1S3Q96PC3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S3Q96PC3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S3Q96PC3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S3Q96PC3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S3Q96PC3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
AP1S3Q96PC3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S3Q96PC3 ESRRAP2-201ENST00000418437 1549 ntBASIC16.34■□□□□ 0.21
AP1S3Q96PC3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S3Q96PC3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S3Q96PC3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
AP1S3Q96PC3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AP1S3Q96PC3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AP1S3Q96PC3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AP1S3Q96PC3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S3Q96PC3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S3Q96PC3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.33■□□□□ 0.2
AP1S3Q96PC3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S3Q96PC3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S3Q96PC3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
AP1S3Q96PC3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
AP1S3Q96PC3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
AP1S3Q96PC3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S3Q96PC3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.33■□□□□ 0.2
AP1S3Q96PC3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S3Q96PC3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S3Q96PC3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S3Q96PC3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S3Q96PC3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S3Q96PC3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms