Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 AC099791.2-201ENST00000605725 427 ntBASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
FOXN4Q96NZ1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN4Q96NZ1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN4Q96NZ1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN4Q96NZ1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN4Q96NZ1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN4Q96NZ1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.45■□□□□ 0.7
FOXN4Q96NZ1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN4Q96NZ1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXN4Q96NZ1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
FOXN4Q96NZ1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN4Q96NZ1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXN4Q96NZ1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 AC092053.2-201ENST00000640557 1818 ntBASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 pRNA.6-201ENST00000610482 90 ntBASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 pRNA.5-201ENST00000612139 90 ntBASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 AC005837.3-201ENST00000612163 286 ntBASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 pRNA.11-201ENST00000618423 90 ntBASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 pRNA.13-201ENST00000619112 90 ntBASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
FOXN4Q96NZ1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN4Q96NZ1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN4Q96NZ1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXN4Q96NZ1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN4Q96NZ1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN4Q96NZ1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.43■□□□□ 0.7
FOXN4Q96NZ1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN4Q96NZ1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN4Q96NZ1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXN4Q96NZ1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
FOXN4Q96NZ1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXN4Q96NZ1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN4Q96NZ1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN4Q96NZ1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN4Q96NZ1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
FOXN4Q96NZ1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN4Q96NZ1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
FOXN4Q96NZ1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN4Q96NZ1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
FOXN4Q96NZ1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.42■□□□□ 0.7
FOXN4Q96NZ1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXN4Q96NZ1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN4Q96NZ1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN4Q96NZ1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN4Q96NZ1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN4Q96NZ1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXN4Q96NZ1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
FOXN4Q96NZ1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXN4Q96NZ1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXN4Q96NZ1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
FOXN4Q96NZ1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXN4Q96NZ1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXN4Q96NZ1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXN4Q96NZ1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXN4Q96NZ1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXN4Q96NZ1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXN4Q96NZ1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXN4Q96NZ1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.41■□□□□ 0.7
FOXN4Q96NZ1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXN4Q96NZ1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.41■□□□□ 0.7
FOXN4Q96NZ1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.41■□□□□ 0.7
FOXN4Q96NZ1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXN4Q96NZ1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXN4Q96NZ1 AC137767.1-201ENST00000602918 1920 ntBASIC19.41■□□□□ 0.7
FOXN4Q96NZ1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
FOXN4Q96NZ1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 C11orf96-202ENST00000528572 1834 ntBASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 AL499627.2-201ENST00000606283 725 ntBASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 AC241377.3-202ENST00000626088 1088 ntBASIC19.4■□□□□ 0.7
FOXN4Q96NZ1 AC241585.3-202ENST00000628937 1088 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms