Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDHR1Q96JP9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
CDHR1Q96JP9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.48■■□□□ 1.51
CDHR1Q96JP9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
CDHR1Q96JP9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.48■■□□□ 1.51
CDHR1Q96JP9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC24.48■■□□□ 1.51
CDHR1Q96JP9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CDHR1Q96JP9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
CDHR1Q96JP9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDHR1Q96JP9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.47■■□□□ 1.51
CDHR1Q96JP9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDHR1Q96JP9 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.47■■□□□ 1.51
CDHR1Q96JP9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CDHR1Q96JP9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.47■■□□□ 1.51
CDHR1Q96JP9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.47■■□□□ 1.51
CDHR1Q96JP9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDHR1Q96JP9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
CDHR1Q96JP9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CDHR1Q96JP9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CDHR1Q96JP9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CDHR1Q96JP9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CDHR1Q96JP9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDHR1Q96JP9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.46■■□□□ 1.51
CDHR1Q96JP9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
CDHR1Q96JP9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.46■■□□□ 1.51
CDHR1Q96JP9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.46■■□□□ 1.51
CDHR1Q96JP9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.46■■□□□ 1.51
CDHR1Q96JP9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.46■■□□□ 1.51
CDHR1Q96JP9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.46■■□□□ 1.51
CDHR1Q96JP9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDHR1Q96JP9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDHR1Q96JP9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.45■■□□□ 1.51
CDHR1Q96JP9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CDHR1Q96JP9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.45■■□□□ 1.51
CDHR1Q96JP9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.45■■□□□ 1.5
CDHR1Q96JP9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDHR1Q96JP9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDHR1Q96JP9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.45■■□□□ 1.5
CDHR1Q96JP9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.45■■□□□ 1.5
CDHR1Q96JP9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.45■■□□□ 1.5
CDHR1Q96JP9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
CDHR1Q96JP9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.45■■□□□ 1.5
CDHR1Q96JP9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
CDHR1Q96JP9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDHR1Q96JP9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDHR1Q96JP9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDHR1Q96JP9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
CDHR1Q96JP9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDHR1Q96JP9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.44■■□□□ 1.5
CDHR1Q96JP9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
CDHR1Q96JP9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.44■■□□□ 1.5
CDHR1Q96JP9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDHR1Q96JP9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDHR1Q96JP9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDHR1Q96JP9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
CDHR1Q96JP9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CDHR1Q96JP9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDHR1Q96JP9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.44■■□□□ 1.5
CDHR1Q96JP9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
CDHR1Q96JP9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
CDHR1Q96JP9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.43■■□□□ 1.5
CDHR1Q96JP9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.43■■□□□ 1.5
CDHR1Q96JP9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.43■■□□□ 1.5
CDHR1Q96JP9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDHR1Q96JP9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDHR1Q96JP9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.43■■□□□ 1.5
CDHR1Q96JP9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDHR1Q96JP9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDHR1Q96JP9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CDHR1Q96JP9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CDHR1Q96JP9 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.42■■□□□ 1.5
CDHR1Q96JP9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.42■■□□□ 1.5
CDHR1Q96JP9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.42■■□□□ 1.5
CDHR1Q96JP9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.42■■□□□ 1.5
CDHR1Q96JP9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.42■■□□□ 1.5
CDHR1Q96JP9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.42■■□□□ 1.5
CDHR1Q96JP9 AL137784.2-201ENST00000607332 1000 ntBASIC24.42■■□□□ 1.5
CDHR1Q96JP9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDHR1Q96JP9 AC005224.4-201ENST00000583262 1652 ntBASIC24.42■■□□□ 1.5
CDHR1Q96JP9 DUSP8P5-201ENST00000422884 1815 ntBASIC24.42■■□□□ 1.5
CDHR1Q96JP9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CDHR1Q96JP9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CDHR1Q96JP9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDHR1Q96JP9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CDHR1Q96JP9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.41■■□□□ 1.5
CDHR1Q96JP9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.41■■□□□ 1.5
CDHR1Q96JP9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.41■■□□□ 1.5
CDHR1Q96JP9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CDHR1Q96JP9 OR7E47P-201ENST00000546390 1422 ntBASIC24.41■■□□□ 1.5
CDHR1Q96JP9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.41■■□□□ 1.5
CDHR1Q96JP9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDHR1Q96JP9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CDHR1Q96JP9 AC079140.4-201ENST00000507448 529 ntBASIC24.4■■□□□ 1.5
CDHR1Q96JP9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.4■■□□□ 1.5
CDHR1Q96JP9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDHR1Q96JP9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.4■■□□□ 1.5
CDHR1Q96JP9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDHR1Q96JP9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDHR1Q96JP9 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CDHR1Q96JP9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms