Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
PDLIM5Q96HC4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.33■■□□□ 1.01
PDLIM5Q96HC4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDLIM5Q96HC4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDLIM5Q96HC4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
PDLIM5Q96HC4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDLIM5Q96HC4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.33■■□□□ 1.01
PDLIM5Q96HC4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDLIM5Q96HC4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDLIM5Q96HC4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PDLIM5Q96HC4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PDLIM5Q96HC4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM5Q96HC4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.32■■□□□ 1
PDLIM5Q96HC4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM5Q96HC4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
PDLIM5Q96HC4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.32■■□□□ 1
PDLIM5Q96HC4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PDLIM5Q96HC4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.32■■□□□ 1
PDLIM5Q96HC4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PDLIM5Q96HC4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM5Q96HC4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM5Q96HC4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM5Q96HC4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM5Q96HC4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM5Q96HC4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM5Q96HC4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.31■■□□□ 1
PDLIM5Q96HC4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM5Q96HC4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM5Q96HC4 AL136116.3-201ENST00000402907 1138 ntBASIC21.31■■□□□ 1
PDLIM5Q96HC4 AC010525.1-201ENST00000585559 441 ntBASIC21.31■■□□□ 1
PDLIM5Q96HC4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDLIM5Q96HC4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM5Q96HC4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PDLIM5Q96HC4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM5Q96HC4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PDLIM5Q96HC4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PDLIM5Q96HC4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.31■■□□□ 1
PDLIM5Q96HC4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
PDLIM5Q96HC4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDLIM5Q96HC4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDLIM5Q96HC4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDLIM5Q96HC4 AC010141.3-201ENST00000456659 717 ntBASIC21.3■■□□□ 1
PDLIM5Q96HC4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.3■■□□□ 1
PDLIM5Q96HC4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.3■■□□□ 1
PDLIM5Q96HC4 AC087239.1-201ENST00000622671 572 ntBASIC21.3■■□□□ 1
PDLIM5Q96HC4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
PDLIM5Q96HC4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM5Q96HC4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PDLIM5Q96HC4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDLIM5Q96HC4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDLIM5Q96HC4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.29■■□□□ 1
PDLIM5Q96HC4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM5Q96HC4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.29■■□□□ 1
PDLIM5Q96HC4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM5Q96HC4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDLIM5Q96HC4 AP005435.1-201ENST00000529293 1178 ntBASIC21.29■■□□□ 1
PDLIM5Q96HC4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
PDLIM5Q96HC4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDLIM5Q96HC4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PDLIM5Q96HC4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDLIM5Q96HC4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDLIM5Q96HC4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PDLIM5Q96HC4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PDLIM5Q96HC4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDLIM5Q96HC4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.28■■□□□ 1
PDLIM5Q96HC4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PDLIM5Q96HC4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.28■■□□□ 1
PDLIM5Q96HC4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
PDLIM5Q96HC4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDLIM5Q96HC4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDLIM5Q96HC4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDLIM5Q96HC4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDLIM5Q96HC4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
PDLIM5Q96HC4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.27■■□□□ 1
PDLIM5Q96HC4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDLIM5Q96HC4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDLIM5Q96HC4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.27■■□□□ 1
PDLIM5Q96HC4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PDLIM5Q96HC4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDLIM5Q96HC4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PDLIM5Q96HC4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDLIM5Q96HC4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PDLIM5Q96HC4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.27■□□□□ 0.99
PDLIM5Q96HC4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 OXCT2P1-201ENST00000447263 1535 ntBASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 AC131212.1-201ENST00000613771 668 ntBASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms