Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.25■□□□□ 0.67
USP9XQ93008 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
USP9XQ93008 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP9XQ93008 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.25■□□□□ 0.67
USP9XQ93008 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP9XQ93008 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.25■□□□□ 0.67
USP9XQ93008 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP9XQ93008 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP9XQ93008 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP9XQ93008 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.25■□□□□ 0.67
USP9XQ93008 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.25■□□□□ 0.67
USP9XQ93008 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.25■□□□□ 0.67
USP9XQ93008 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.25■□□□□ 0.67
USP9XQ93008 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.25■□□□□ 0.67
USP9XQ93008 AC013268.1-206ENST00000638368 961 ntBASIC19.25■□□□□ 0.67
USP9XQ93008 AC112229.1-201ENST00000639295 961 ntBASIC19.25■□□□□ 0.67
USP9XQ93008 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.24■□□□□ 0.67
USP9XQ93008 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.24■□□□□ 0.67
USP9XQ93008 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP9XQ93008 AP001160.3-201ENST00000601484 763 ntBASIC19.24■□□□□ 0.67
USP9XQ93008 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
USP9XQ93008 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.24■□□□□ 0.67
USP9XQ93008 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP9XQ93008 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP9XQ93008 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP9XQ93008 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.23■□□□□ 0.67
USP9XQ93008 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.23■□□□□ 0.67
USP9XQ93008 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.23■□□□□ 0.67
USP9XQ93008 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.23■□□□□ 0.67
USP9XQ93008 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP9XQ93008 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP9XQ93008 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP9XQ93008 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP9XQ93008 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP9XQ93008 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP9XQ93008 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP9XQ93008 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.23■□□□□ 0.67
USP9XQ93008 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.23■□□□□ 0.67
USP9XQ93008 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP9XQ93008 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP9XQ93008 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP9XQ93008 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP9XQ93008 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP9XQ93008 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP9XQ93008 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP9XQ93008 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP9XQ93008 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP9XQ93008 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
USP9XQ93008 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.22■□□□□ 0.67
USP9XQ93008 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP9XQ93008 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP9XQ93008 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
USP9XQ93008 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP9XQ93008 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP9XQ93008 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP9XQ93008 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.22■□□□□ 0.67
USP9XQ93008 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP9XQ93008 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP9XQ93008 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP9XQ93008 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.22■□□□□ 0.67
USP9XQ93008 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP9XQ93008 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP9XQ93008 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP9XQ93008 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
USP9XQ93008 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP9XQ93008 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.21■□□□□ 0.67
USP9XQ93008 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.21■□□□□ 0.67
USP9XQ93008 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
USP9XQ93008 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP9XQ93008 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.21■□□□□ 0.67
USP9XQ93008 AC073912.3-201ENST00000624414 853 ntBASIC19.21■□□□□ 0.67
USP9XQ93008 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.21■□□□□ 0.67
USP9XQ93008 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP9XQ93008 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.2■□□□□ 0.66
USP9XQ93008 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP9XQ93008 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.2■□□□□ 0.66
USP9XQ93008 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.2■□□□□ 0.66
USP9XQ93008 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
USP9XQ93008 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.2■□□□□ 0.66
USP9XQ93008 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP9XQ93008 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.2■□□□□ 0.66
USP9XQ93008 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
USP9XQ93008 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
USP9XQ93008 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.2■□□□□ 0.66
USP9XQ93008 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP9XQ93008 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.19■□□□□ 0.66
USP9XQ93008 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP9XQ93008 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP9XQ93008 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP9XQ93008 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.19■□□□□ 0.66
USP9XQ93008 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
USP9XQ93008 AC005224.4-201ENST00000583262 1652 ntBASIC19.19■□□□□ 0.66
USP9XQ93008 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP9XQ93008 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP9XQ93008 UNC93B5-201ENST00000530315 699 ntBASIC19.19■□□□□ 0.66
USP9XQ93008 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
USP9XQ93008 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.18■□□□□ 0.66
USP9XQ93008 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP9XQ93008 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP9XQ93008 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms