Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHF3Q92576 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHF3Q92576 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.68■□□□□ 0.74
PHF3Q92576 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PHF3Q92576 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PHF3Q92576 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.68■□□□□ 0.74
PHF3Q92576 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PHF3Q92576 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.68■□□□□ 0.74
PHF3Q92576 TPRG1LP1-201ENST00000598702 760 ntBASIC19.68■□□□□ 0.74
PHF3Q92576 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.68■□□□□ 0.74
PHF3Q92576 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PHF3Q92576 AL353803.4-201ENST00000565882 1934 ntBASIC19.68■□□□□ 0.74
PHF3Q92576 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
PHF3Q92576 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PHF3Q92576 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHF3Q92576 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.67■□□□□ 0.74
PHF3Q92576 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PHF3Q92576 AC016769.1-201ENST00000409132 1010 ntBASIC19.67■□□□□ 0.74
PHF3Q92576 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.67■□□□□ 0.74
PHF3Q92576 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PHF3Q92576 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PHF3Q92576 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.67■□□□□ 0.74
PHF3Q92576 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHF3Q92576 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHF3Q92576 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHF3Q92576 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHF3Q92576 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PHF3Q92576 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.66■□□□□ 0.74
PHF3Q92576 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.66■□□□□ 0.74
PHF3Q92576 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF3Q92576 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF3Q92576 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF3Q92576 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.66■□□□□ 0.74
PHF3Q92576 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.66■□□□□ 0.74
PHF3Q92576 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.66■□□□□ 0.74
PHF3Q92576 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PHF3Q92576 LINC01529-204ENST00000636474 1715 ntBASIC19.66■□□□□ 0.74
PHF3Q92576 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF3Q92576 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF3Q92576 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
PHF3Q92576 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PHF3Q92576 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
PHF3Q92576 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF3Q92576 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.66■□□□□ 0.74
PHF3Q92576 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PHF3Q92576 AC233723.2-201ENST00000623798 2106 ntBASIC19.65■□□□□ 0.74
PHF3Q92576 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF3Q92576 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PHF3Q92576 C1orf229-201ENST00000623686 2258 ntBASIC19.65■□□□□ 0.74
PHF3Q92576 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF3Q92576 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF3Q92576 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF3Q92576 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PHF3Q92576 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PHF3Q92576 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.65■□□□□ 0.74
PHF3Q92576 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF3Q92576 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PHF3Q92576 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PHF3Q92576 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PHF3Q92576 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.64■□□□□ 0.74
PHF3Q92576 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.74
PHF3Q92576 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PHF3Q92576 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.64■□□□□ 0.74
PHF3Q92576 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.64■□□□□ 0.73
PHF3Q92576 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHF3Q92576 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PHF3Q92576 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHF3Q92576 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHF3Q92576 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PHF3Q92576 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHF3Q92576 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PHF3Q92576 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PHF3Q92576 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.64■□□□□ 0.73
PHF3Q92576 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHF3Q92576 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHF3Q92576 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.63■□□□□ 0.73
PHF3Q92576 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.63■□□□□ 0.73
PHF3Q92576 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.63■□□□□ 0.73
PHF3Q92576 AC087239.1-201ENST00000622671 572 ntBASIC19.63■□□□□ 0.73
PHF3Q92576 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PHF3Q92576 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.63■□□□□ 0.73
PHF3Q92576 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHF3Q92576 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHF3Q92576 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHF3Q92576 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PHF3Q92576 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PHF3Q92576 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.62■□□□□ 0.73
PHF3Q92576 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHF3Q92576 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PHF3Q92576 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PHF3Q92576 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.62■□□□□ 0.73
PHF3Q92576 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PHF3Q92576 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.62■□□□□ 0.73
PHF3Q92576 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.62■□□□□ 0.73
PHF3Q92576 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.62■□□□□ 0.73
PHF3Q92576 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PHF3Q92576 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.62■□□□□ 0.73
PHF3Q92576 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.62■□□□□ 0.73
PHF3Q92576 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.62■□□□□ 0.73
PHF3Q92576 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms