Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.16■■□□□ 1.14
CHD5Q8TDI0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.16■■□□□ 1.14
CHD5Q8TDI0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD5Q8TDI0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CHD5Q8TDI0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.15■■□□□ 1.14
CHD5Q8TDI0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD5Q8TDI0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
CHD5Q8TDI0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD5Q8TDI0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD5Q8TDI0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD5Q8TDI0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.15■■□□□ 1.14
CHD5Q8TDI0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.15■■□□□ 1.14
CHD5Q8TDI0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD5Q8TDI0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD5Q8TDI0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
CHD5Q8TDI0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHD5Q8TDI0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.14■■□□□ 1.14
CHD5Q8TDI0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.14■■□□□ 1.14
CHD5Q8TDI0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.14■■□□□ 1.13
CHD5Q8TDI0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.14■■□□□ 1.13
CHD5Q8TDI0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHD5Q8TDI0 AC034268.1-201ENST00000441047 882 ntBASIC22.14■■□□□ 1.13
CHD5Q8TDI0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHD5Q8TDI0 AL034346.1-201ENST00000568244 1277 ntBASIC22.14■■□□□ 1.13
CHD5Q8TDI0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD5Q8TDI0 AC080038.3-201ENST00000623346 1952 ntBASIC22.13■■□□□ 1.13
CHD5Q8TDI0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD5Q8TDI0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.13■■□□□ 1.13
CHD5Q8TDI0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD5Q8TDI0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD5Q8TDI0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.13■■□□□ 1.13
CHD5Q8TDI0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD5Q8TDI0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.13■■□□□ 1.13
CHD5Q8TDI0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD5Q8TDI0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.13■■□□□ 1.13
CHD5Q8TDI0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD5Q8TDI0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.13■■□□□ 1.13
CHD5Q8TDI0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD5Q8TDI0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 AC097381.1-201ENST00000429019 1296 ntBASIC22.12■■□□□ 1.13
CHD5Q8TDI0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD5Q8TDI0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CHD5Q8TDI0 AC233723.2-201ENST00000623798 2106 ntBASIC22.11■■□□□ 1.13
CHD5Q8TDI0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHD5Q8TDI0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHD5Q8TDI0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHD5Q8TDI0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHD5Q8TDI0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
CHD5Q8TDI0 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.11■■□□□ 1.13
CHD5Q8TDI0 AC123595.1-201ENST00000440769 1046 ntBASIC22.11■■□□□ 1.13
CHD5Q8TDI0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.11■■□□□ 1.13
CHD5Q8TDI0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.11■■□□□ 1.13
CHD5Q8TDI0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHD5Q8TDI0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.11■■□□□ 1.13
CHD5Q8TDI0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHD5Q8TDI0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.1■■□□□ 1.13
CHD5Q8TDI0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.1■■□□□ 1.13
CHD5Q8TDI0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.1■■□□□ 1.13
CHD5Q8TDI0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.1■■□□□ 1.13
CHD5Q8TDI0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHD5Q8TDI0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHD5Q8TDI0 OR7E47P-201ENST00000546390 1422 ntBASIC22.1■■□□□ 1.13
CHD5Q8TDI0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD5Q8TDI0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHD5Q8TDI0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHD5Q8TDI0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.1■■□□□ 1.13
CHD5Q8TDI0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHD5Q8TDI0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.1■■□□□ 1.13
CHD5Q8TDI0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD5Q8TDI0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD5Q8TDI0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.09■■□□□ 1.13
CHD5Q8TDI0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.09■■□□□ 1.13
CHD5Q8TDI0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD5Q8TDI0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CHD5Q8TDI0 KRT18P14-201ENST00000534205 1250 ntBASIC22.09■■□□□ 1.13
CHD5Q8TDI0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
CHD5Q8TDI0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD5Q8TDI0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CHD5Q8TDI0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD5Q8TDI0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.09■■□□□ 1.13
CHD5Q8TDI0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
CHD5Q8TDI0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.08■■□□□ 1.13
CHD5Q8TDI0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
CHD5Q8TDI0 AC087623.3-201ENST00000607047 1098 ntBASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms