Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
TRPM4Q8TD43 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.13■■□□□ 1.77
TRPM4Q8TD43 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRPM4Q8TD43 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
TRPM4Q8TD43 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC26.13■■□□□ 1.77
TRPM4Q8TD43 AP001160.3-201ENST00000601484 763 ntBASIC26.13■■□□□ 1.77
TRPM4Q8TD43 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRPM4Q8TD43 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRPM4Q8TD43 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TRPM4Q8TD43 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TRPM4Q8TD43 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC26.12■■□□□ 1.77
TRPM4Q8TD43 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TRPM4Q8TD43 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TRPM4Q8TD43 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TRPM4Q8TD43 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC26.12■■□□□ 1.77
TRPM4Q8TD43 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TRPM4Q8TD43 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.12■■□□□ 1.77
TRPM4Q8TD43 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TRPM4Q8TD43 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.12■■□□□ 1.77
TRPM4Q8TD43 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRPM4Q8TD43 POU5F1P3-201ENST00000428824 1078 ntBASIC26.11■■□□□ 1.77
TRPM4Q8TD43 APTR-203ENST00000430801 583 ntTSL 5 BASIC26.11■■□□□ 1.77
TRPM4Q8TD43 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.11■■□□□ 1.77
TRPM4Q8TD43 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRPM4Q8TD43 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TRPM4Q8TD43 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
TRPM4Q8TD43 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.11■■□□□ 1.77
TRPM4Q8TD43 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRPM4Q8TD43 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRPM4Q8TD43 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
TRPM4Q8TD43 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRPM4Q8TD43 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TRPM4Q8TD43 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
TRPM4Q8TD43 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRPM4Q8TD43 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
TRPM4Q8TD43 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRPM4Q8TD43 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRPM4Q8TD43 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TRPM4Q8TD43 AC138932.3-201ENST00000567634 1902 ntBASIC26.1■■□□□ 1.77
TRPM4Q8TD43 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.09■■□□□ 1.77
TRPM4Q8TD43 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TRPM4Q8TD43 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TRPM4Q8TD43 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.09■■□□□ 1.77
TRPM4Q8TD43 AC133552.2-202ENST00000575694 574 ntBASIC26.09■■□□□ 1.77
TRPM4Q8TD43 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TRPM4Q8TD43 ITM2C-210ENST00000620962 501 ntBASIC26.09■■□□□ 1.77
TRPM4Q8TD43 AL353803.4-201ENST00000565882 1934 ntBASIC26.09■■□□□ 1.77
TRPM4Q8TD43 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TRPM4Q8TD43 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC26.08■■□□□ 1.77
TRPM4Q8TD43 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRPM4Q8TD43 AC009237.3-201ENST00000393279 1427 ntBASIC26.08■■□□□ 1.77
TRPM4Q8TD43 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
TRPM4Q8TD43 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
TRPM4Q8TD43 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TRPM4Q8TD43 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
TRPM4Q8TD43 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.08■■□□□ 1.77
TRPM4Q8TD43 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TRPM4Q8TD43 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
TRPM4Q8TD43 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.08■■□□□ 1.76
TRPM4Q8TD43 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TRPM4Q8TD43 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.07■■□□□ 1.76
TRPM4Q8TD43 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TRPM4Q8TD43 PRORSD1P-201ENST00000295112 541 ntBASIC26.07■■□□□ 1.76
TRPM4Q8TD43 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TRPM4Q8TD43 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TRPM4Q8TD43 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.07■■□□□ 1.76
TRPM4Q8TD43 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.07■■□□□ 1.76
TRPM4Q8TD43 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TRPM4Q8TD43 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TRPM4Q8TD43 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
TRPM4Q8TD43 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TRPM4Q8TD43 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC26.06■■□□□ 1.76
TRPM4Q8TD43 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TRPM4Q8TD43 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TRPM4Q8TD43 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
TRPM4Q8TD43 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TRPM4Q8TD43 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
TRPM4Q8TD43 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
TRPM4Q8TD43 SERP1-208ENST00000491660 830 ntTSL 2 BASIC26.05■■□□□ 1.76
TRPM4Q8TD43 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRPM4Q8TD43 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC26.05■■□□□ 1.76
TRPM4Q8TD43 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRPM4Q8TD43 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TRPM4Q8TD43 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
TRPM4Q8TD43 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
TRPM4Q8TD43 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC26.04■■□□□ 1.76
TRPM4Q8TD43 RNA5SP413-201ENST00000516373 109 ntBASIC26.04■■□□□ 1.76
TRPM4Q8TD43 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.04■■□□□ 1.76
TRPM4Q8TD43 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.04■■□□□ 1.76
TRPM4Q8TD43 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
TRPM4Q8TD43 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TRPM4Q8TD43 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
TRPM4Q8TD43 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
TRPM4Q8TD43 KRT18P29-201ENST00000397031 1267 ntBASIC26.03■■□□□ 1.76
TRPM4Q8TD43 UQCRFS1P1-201ENST00000435169 820 ntBASIC26.03■■□□□ 1.76
TRPM4Q8TD43 ARL16-209ENST00000573715 763 ntTSL 3 BASIC26.03■■□□□ 1.76
TRPM4Q8TD43 ARL16-211ENST00000576135 694 ntTSL 3 BASIC26.03■■□□□ 1.76
TRPM4Q8TD43 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TRPM4Q8TD43 AC010536.3-201ENST00000620306 533 ntBASIC26.03■■□□□ 1.76
TRPM4Q8TD43 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms