Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.91□□□□□ -0.02
ALMS1Q8TCU4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.91□□□□□ -0.02
ALMS1Q8TCU4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ALMS1Q8TCU4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ALMS1Q8TCU4 AC010141.3-201ENST00000456659 717 ntBASIC14.9□□□□□ -0.02
ALMS1Q8TCU4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.9□□□□□ -0.02
ALMS1Q8TCU4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
ALMS1Q8TCU4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ALMS1Q8TCU4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
ALMS1Q8TCU4 AC093787.1-201ENST00000450396 207 ntBASIC14.9□□□□□ -0.02
ALMS1Q8TCU4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ALMS1Q8TCU4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ALMS1Q8TCU4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.9□□□□□ -0.02
ALMS1Q8TCU4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ALMS1Q8TCU4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ALMS1Q8TCU4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ALMS1Q8TCU4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
ALMS1Q8TCU4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.89□□□□□ -0.03
ALMS1Q8TCU4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALMS1Q8TCU4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ALMS1Q8TCU4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ALMS1Q8TCU4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ALMS1Q8TCU4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.89□□□□□ -0.03
ALMS1Q8TCU4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.89□□□□□ -0.03
ALMS1Q8TCU4 AC073648.6-201ENST00000641589 218 ntBASIC14.89□□□□□ -0.03
ALMS1Q8TCU4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALMS1Q8TCU4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ALMS1Q8TCU4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ALMS1Q8TCU4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.89□□□□□ -0.03
ALMS1Q8TCU4 AC010536.3-201ENST00000620306 533 ntBASIC14.89□□□□□ -0.03
ALMS1Q8TCU4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.89□□□□□ -0.03
ALMS1Q8TCU4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ALMS1Q8TCU4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ALMS1Q8TCU4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ALMS1Q8TCU4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.88□□□□□ -0.03
ALMS1Q8TCU4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ALMS1Q8TCU4 AC004687.1-201ENST00000579003 1625 ntBASIC14.88□□□□□ -0.03
ALMS1Q8TCU4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.88□□□□□ -0.03
ALMS1Q8TCU4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.88□□□□□ -0.03
ALMS1Q8TCU4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ALMS1Q8TCU4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.88□□□□□ -0.03
ALMS1Q8TCU4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ALMS1Q8TCU4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.88□□□□□ -0.03
ALMS1Q8TCU4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ALMS1Q8TCU4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ALMS1Q8TCU4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ALMS1Q8TCU4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.88□□□□□ -0.03
ALMS1Q8TCU4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ALMS1Q8TCU4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 AC211429.1-201ENST00000415277 523 ntBASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ALMS1Q8TCU4 AC009237.3-201ENST00000393279 1427 ntBASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 AC006058.3-201ENST00000606217 1069 ntBASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 AC068338.2-201ENST00000563278 1430 ntBASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 MIPEPP3-201ENST00000412105 444 ntBASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ALMS1Q8TCU4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.85□□□□□ -0.03
ALMS1Q8TCU4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ALMS1Q8TCU4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.85□□□□□ -0.03
ALMS1Q8TCU4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ALMS1Q8TCU4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ALMS1Q8TCU4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ALMS1Q8TCU4 AC079630.1-202ENST00000618127 1840 ntBASIC14.85□□□□□ -0.03
ALMS1Q8TCU4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ALMS1Q8TCU4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ALMS1Q8TCU4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms