Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01560Q8TB33 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01560Q8TB33 DUSP8P3-201ENST00000399571 1760 ntBASIC18.93■□□□□ 0.62
LINC01560Q8TB33 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01560Q8TB33 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.92■□□□□ 0.62
LINC01560Q8TB33 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LINC01560Q8TB33 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01560Q8TB33 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01560Q8TB33 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01560Q8TB33 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01560Q8TB33 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.91■□□□□ 0.62
LINC01560Q8TB33 CROCCP5-201ENST00000436658 830 ntBASIC18.91■□□□□ 0.62
LINC01560Q8TB33 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01560Q8TB33 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01560Q8TB33 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.91■□□□□ 0.62
LINC01560Q8TB33 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01560Q8TB33 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01560Q8TB33 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.91■□□□□ 0.62
LINC01560Q8TB33 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
LINC01560Q8TB33 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.9■□□□□ 0.62
LINC01560Q8TB33 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LINC01560Q8TB33 KRT18P11-201ENST00000435214 1283 ntBASIC18.9■□□□□ 0.62
LINC01560Q8TB33 AC104771.1-201ENST00000603335 964 ntBASIC18.9■□□□□ 0.62
LINC01560Q8TB33 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LINC01560Q8TB33 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.9■□□□□ 0.62
LINC01560Q8TB33 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01560Q8TB33 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01560Q8TB33 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.9■□□□□ 0.62
LINC01560Q8TB33 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01560Q8TB33 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.89■□□□□ 0.62
LINC01560Q8TB33 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01560Q8TB33 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
LINC01560Q8TB33 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01560Q8TB33 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.89■□□□□ 0.61
LINC01560Q8TB33 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.89■□□□□ 0.61
LINC01560Q8TB33 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.89■□□□□ 0.61
LINC01560Q8TB33 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LINC01560Q8TB33 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01560Q8TB33 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.89■□□□□ 0.61
LINC01560Q8TB33 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01560Q8TB33 AC005224.4-201ENST00000583262 1652 ntBASIC18.89■□□□□ 0.61
LINC01560Q8TB33 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 AL109923.1-201ENST00000618799 583 ntBASIC18.88■□□□□ 0.61
LINC01560Q8TB33 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01560Q8TB33 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01560Q8TB33 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01560Q8TB33 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LINC01560Q8TB33 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01560Q8TB33 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01560Q8TB33 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.87■□□□□ 0.61
LINC01560Q8TB33 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.87■□□□□ 0.61
LINC01560Q8TB33 AC104187.1-201ENST00000607510 612 ntBASIC18.87■□□□□ 0.61
LINC01560Q8TB33 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.87■□□□□ 0.61
LINC01560Q8TB33 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LINC01560Q8TB33 AC009237.3-201ENST00000393279 1427 ntBASIC18.86■□□□□ 0.61
LINC01560Q8TB33 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01560Q8TB33 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01560Q8TB33 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01560Q8TB33 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01560Q8TB33 MIR663A-201ENST00000385250 93 ntBASIC18.86■□□□□ 0.61
LINC01560Q8TB33 AL355802.2-201ENST00000402069 882 ntBASIC18.86■□□□□ 0.61
LINC01560Q8TB33 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.86■□□□□ 0.61
LINC01560Q8TB33 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms