Protein–RNA interactions for Protein: Q8NEP9

ZNF555, Zinc finger protein 555, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF555Q8NEP9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF555Q8NEP9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.13■□□□□ 0.81
ZNF555Q8NEP9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF555Q8NEP9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF555Q8NEP9 MIR6765-201ENST00000614092 87 ntBASIC20.12■□□□□ 0.81
ZNF555Q8NEP9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ZNF555Q8NEP9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF555Q8NEP9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF555Q8NEP9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF555Q8NEP9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.12■□□□□ 0.81
ZNF555Q8NEP9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.12■□□□□ 0.81
ZNF555Q8NEP9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF555Q8NEP9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF555Q8NEP9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF555Q8NEP9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF555Q8NEP9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF555Q8NEP9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF555Q8NEP9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF555Q8NEP9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF555Q8NEP9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF555Q8NEP9 AC092667.1-201ENST00000434301 2586 ntBASIC20.11■□□□□ 0.81
ZNF555Q8NEP9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF555Q8NEP9 SPCS2P3-201ENST00000500401 656 ntBASIC20.11■□□□□ 0.81
ZNF555Q8NEP9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF555Q8NEP9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
ZNF555Q8NEP9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF555Q8NEP9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF555Q8NEP9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF555Q8NEP9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.11■□□□□ 0.81
ZNF555Q8NEP9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.11■□□□□ 0.81
ZNF555Q8NEP9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 LINC01960-201ENST00000563759 1884 ntBASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.1■□□□□ 0.81
ZNF555Q8NEP9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ZNF555Q8NEP9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
ZNF555Q8NEP9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF555Q8NEP9 LINC01521-201ENST00000504184 1943 ntBASIC20.09■□□□□ 0.81
ZNF555Q8NEP9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF555Q8NEP9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF555Q8NEP9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.08■□□□□ 0.81
ZNF555Q8NEP9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF555Q8NEP9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF555Q8NEP9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.08■□□□□ 0.81
ZNF555Q8NEP9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.08■□□□□ 0.81
ZNF555Q8NEP9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF555Q8NEP9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF555Q8NEP9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
ZNF555Q8NEP9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
ZNF555Q8NEP9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZNF555Q8NEP9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.08■□□□□ 0.8
ZNF555Q8NEP9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.08■□□□□ 0.8
ZNF555Q8NEP9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
ZNF555Q8NEP9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 MIR639-201ENST00000384974 98 ntBASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 GPX1-201ENST00000419349 1106 ntBASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 AL592293.1-201ENST00000502889 1188 ntBASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 Z98882.1-201ENST00000622160 2253 ntBASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF555Q8NEP9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ZNF555Q8NEP9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ZNF555Q8NEP9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF555Q8NEP9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF555Q8NEP9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF555Q8NEP9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms