Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRFBP1Q8NEF9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRFBP1Q8NEF9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRFBP1Q8NEF9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRFBP1Q8NEF9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.74■□□□□ 0.91
SRFBP1Q8NEF9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.74■□□□□ 0.91
SRFBP1Q8NEF9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SRFBP1Q8NEF9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
SRFBP1Q8NEF9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.74■□□□□ 0.91
SRFBP1Q8NEF9 AL355001.2-201ENST00000620617 1191 ntBASIC20.74■□□□□ 0.91
SRFBP1Q8NEF9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.74■□□□□ 0.91
SRFBP1Q8NEF9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
SRFBP1Q8NEF9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRFBP1Q8NEF9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SRFBP1Q8NEF9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SRFBP1Q8NEF9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SRFBP1Q8NEF9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SRFBP1Q8NEF9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SRFBP1Q8NEF9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRFBP1Q8NEF9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRFBP1Q8NEF9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SRFBP1Q8NEF9 AC027682.1-201ENST00000562846 899 ntBASIC20.73■□□□□ 0.91
SRFBP1Q8NEF9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SRFBP1Q8NEF9 AC137767.1-201ENST00000602918 1920 ntBASIC20.72■□□□□ 0.91
SRFBP1Q8NEF9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRFBP1Q8NEF9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SRFBP1Q8NEF9 AC079089.2-201ENST00000531211 1277 ntBASIC20.72■□□□□ 0.91
SRFBP1Q8NEF9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.72■□□□□ 0.91
SRFBP1Q8NEF9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SRFBP1Q8NEF9 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.72■□□□□ 0.91
SRFBP1Q8NEF9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRFBP1Q8NEF9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRFBP1Q8NEF9 AC079834.2-201ENST00000609776 1949 ntBASIC20.72■□□□□ 0.91
SRFBP1Q8NEF9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRFBP1Q8NEF9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.72■□□□□ 0.91
SRFBP1Q8NEF9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRFBP1Q8NEF9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SRFBP1Q8NEF9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SRFBP1Q8NEF9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.71■□□□□ 0.91
SRFBP1Q8NEF9 CLDN5-201ENST00000403084 2357 ntBASIC20.71■□□□□ 0.91
SRFBP1Q8NEF9 ECEL1P1-201ENST00000373592 1742 ntBASIC20.71■□□□□ 0.91
SRFBP1Q8NEF9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRFBP1Q8NEF9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRFBP1Q8NEF9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SRFBP1Q8NEF9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SRFBP1Q8NEF9 AC126544.1-201ENST00000580842 1059 ntBASIC20.71■□□□□ 0.91
SRFBP1Q8NEF9 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.71■□□□□ 0.91
SRFBP1Q8NEF9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRFBP1Q8NEF9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SRFBP1Q8NEF9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SRFBP1Q8NEF9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SRFBP1Q8NEF9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SRFBP1Q8NEF9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SRFBP1Q8NEF9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRFBP1Q8NEF9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRFBP1Q8NEF9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SRFBP1Q8NEF9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRFBP1Q8NEF9 OXCT2P1-201ENST00000447263 1535 ntBASIC20.7■□□□□ 0.9
SRFBP1Q8NEF9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRFBP1Q8NEF9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.7■□□□□ 0.9
SRFBP1Q8NEF9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.7■□□□□ 0.9
SRFBP1Q8NEF9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.7■□□□□ 0.9
SRFBP1Q8NEF9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SRFBP1Q8NEF9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRFBP1Q8NEF9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SRFBP1Q8NEF9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SRFBP1Q8NEF9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
SRFBP1Q8NEF9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.69■□□□□ 0.9
SRFBP1Q8NEF9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRFBP1Q8NEF9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRFBP1Q8NEF9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.69■□□□□ 0.9
SRFBP1Q8NEF9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRFBP1Q8NEF9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRFBP1Q8NEF9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SRFBP1Q8NEF9 AC008764.7-201ENST00000593779 1081 ntBASIC20.69■□□□□ 0.9
SRFBP1Q8NEF9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.69■□□□□ 0.9
SRFBP1Q8NEF9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRFBP1Q8NEF9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.69■□□□□ 0.9
SRFBP1Q8NEF9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRFBP1Q8NEF9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SRFBP1Q8NEF9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRFBP1Q8NEF9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRFBP1Q8NEF9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SRFBP1Q8NEF9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SRFBP1Q8NEF9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRFBP1Q8NEF9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SRFBP1Q8NEF9 AC139530.1-201ENST00000575312 1977 ntBASIC20.68■□□□□ 0.9
SRFBP1Q8NEF9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRFBP1Q8NEF9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
SRFBP1Q8NEF9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRFBP1Q8NEF9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.67■□□□□ 0.9
SRFBP1Q8NEF9 AC099791.1-201ENST00000416440 715 ntBASIC20.67■□□□□ 0.9
SRFBP1Q8NEF9 AC091305.1-201ENST00000479476 895 ntBASIC20.67■□□□□ 0.9
SRFBP1Q8NEF9 AP001330.3-201ENST00000520123 633 ntBASIC20.67■□□□□ 0.9
SRFBP1Q8NEF9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.67■□□□□ 0.9
SRFBP1Q8NEF9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRFBP1Q8NEF9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.67■□□□□ 0.9
SRFBP1Q8NEF9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRFBP1Q8NEF9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRFBP1Q8NEF9 RASA4CP-201ENST00000424092 1398 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms