Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF248Q8NDW4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.77■□□□□ 0.92
ZNF248Q8NDW4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF248Q8NDW4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.77■□□□□ 0.92
ZNF248Q8NDW4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF248Q8NDW4 KRT18P6-201ENST00000555540 1265 ntBASIC20.77■□□□□ 0.92
ZNF248Q8NDW4 AL121832.2-201ENST00000610979 668 ntBASIC20.77■□□□□ 0.92
ZNF248Q8NDW4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF248Q8NDW4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF248Q8NDW4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF248Q8NDW4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF248Q8NDW4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.76■□□□□ 0.91
ZNF248Q8NDW4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF248Q8NDW4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF248Q8NDW4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF248Q8NDW4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF248Q8NDW4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF248Q8NDW4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.76■□□□□ 0.91
ZNF248Q8NDW4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF248Q8NDW4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF248Q8NDW4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.76■□□□□ 0.91
ZNF248Q8NDW4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF248Q8NDW4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF248Q8NDW4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF248Q8NDW4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF248Q8NDW4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF248Q8NDW4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF248Q8NDW4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF248Q8NDW4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF248Q8NDW4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF248Q8NDW4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF248Q8NDW4 AC144652.1-201ENST00000609974 1624 ntBASIC20.75■□□□□ 0.91
ZNF248Q8NDW4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF248Q8NDW4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.75■□□□□ 0.91
ZNF248Q8NDW4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ZNF248Q8NDW4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF248Q8NDW4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF248Q8NDW4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF248Q8NDW4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF248Q8NDW4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF248Q8NDW4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF248Q8NDW4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF248Q8NDW4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ZNF248Q8NDW4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
ZNF248Q8NDW4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
ZNF248Q8NDW4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.74■□□□□ 0.91
ZNF248Q8NDW4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF248Q8NDW4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF248Q8NDW4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF248Q8NDW4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF248Q8NDW4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF248Q8NDW4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF248Q8NDW4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF248Q8NDW4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF248Q8NDW4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF248Q8NDW4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF248Q8NDW4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ZNF248Q8NDW4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF248Q8NDW4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF248Q8NDW4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.73■□□□□ 0.91
ZNF248Q8NDW4 AC068587.7-201ENST00000641602 218 ntBASIC20.73■□□□□ 0.91
ZNF248Q8NDW4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF248Q8NDW4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF248Q8NDW4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF248Q8NDW4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF248Q8NDW4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 TSPY6P-201ENST00000448518 926 ntBASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 AC079140.4-201ENST00000507448 529 ntBASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 AC083906.2-201ENST00000511578 360 ntBASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.72■□□□□ 0.91
ZNF248Q8NDW4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF248Q8NDW4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF248Q8NDW4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.71■□□□□ 0.91
ZNF248Q8NDW4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ZNF248Q8NDW4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms