Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
PNMA1Q8ND90 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PNMA1Q8ND90 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.38■■□□□ 1.65
PNMA1Q8ND90 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PNMA1Q8ND90 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PNMA1Q8ND90 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PNMA1Q8ND90 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.37■■□□□ 1.65
PNMA1Q8ND90 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
PNMA1Q8ND90 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PNMA1Q8ND90 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.37■■□□□ 1.65
PNMA1Q8ND90 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.37■■□□□ 1.65
PNMA1Q8ND90 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PNMA1Q8ND90 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.37■■□□□ 1.65
PNMA1Q8ND90 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.37■■□□□ 1.65
PNMA1Q8ND90 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
PNMA1Q8ND90 AC087623.3-201ENST00000607047 1098 ntBASIC25.37■■□□□ 1.65
PNMA1Q8ND90 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PNMA1Q8ND90 AC137767.1-201ENST00000602918 1920 ntBASIC25.37■■□□□ 1.65
PNMA1Q8ND90 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PNMA1Q8ND90 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
PNMA1Q8ND90 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PNMA1Q8ND90 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
PNMA1Q8ND90 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PNMA1Q8ND90 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PNMA1Q8ND90 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PNMA1Q8ND90 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PNMA1Q8ND90 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PNMA1Q8ND90 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.36■■□□□ 1.65
PNMA1Q8ND90 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.36■■□□□ 1.65
PNMA1Q8ND90 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
PNMA1Q8ND90 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
PNMA1Q8ND90 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PNMA1Q8ND90 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
PNMA1Q8ND90 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PNMA1Q8ND90 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PNMA1Q8ND90 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.35■■□□□ 1.65
PNMA1Q8ND90 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
PNMA1Q8ND90 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.35■■□□□ 1.65
PNMA1Q8ND90 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
PNMA1Q8ND90 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
PNMA1Q8ND90 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PNMA1Q8ND90 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
PNMA1Q8ND90 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PNMA1Q8ND90 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PNMA1Q8ND90 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
PNMA1Q8ND90 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PNMA1Q8ND90 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PNMA1Q8ND90 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.34■■□□□ 1.65
PNMA1Q8ND90 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
PNMA1Q8ND90 AC123595.1-201ENST00000440769 1046 ntBASIC25.34■■□□□ 1.65
PNMA1Q8ND90 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.34■■□□□ 1.65
PNMA1Q8ND90 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
PNMA1Q8ND90 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PNMA1Q8ND90 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PNMA1Q8ND90 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
PNMA1Q8ND90 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PNMA1Q8ND90 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
PNMA1Q8ND90 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PNMA1Q8ND90 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PNMA1Q8ND90 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PNMA1Q8ND90 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PNMA1Q8ND90 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PNMA1Q8ND90 LINC00526-201ENST00000581067 1875 ntBASIC25.33■■□□□ 1.65
PNMA1Q8ND90 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.33■■□□□ 1.65
PNMA1Q8ND90 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.33■■□□□ 1.65
PNMA1Q8ND90 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.33■■□□□ 1.65
PNMA1Q8ND90 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PNMA1Q8ND90 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PNMA1Q8ND90 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PNMA1Q8ND90 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.33■■□□□ 1.64
PNMA1Q8ND90 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PNMA1Q8ND90 BX005040.4-201ENST00000637145 1518 ntBASIC25.32■■□□□ 1.64
PNMA1Q8ND90 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
PNMA1Q8ND90 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PNMA1Q8ND90 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PNMA1Q8ND90 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PNMA1Q8ND90 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.32■■□□□ 1.64
PNMA1Q8ND90 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
PNMA1Q8ND90 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PNMA1Q8ND90 ESRRAP2-201ENST00000418437 1549 ntBASIC25.32■■□□□ 1.64
PNMA1Q8ND90 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
PNMA1Q8ND90 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.31■■□□□ 1.64
PNMA1Q8ND90 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
PNMA1Q8ND90 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PNMA1Q8ND90 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PNMA1Q8ND90 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PNMA1Q8ND90 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PNMA1Q8ND90 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
PNMA1Q8ND90 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC25.31■■□□□ 1.64
PNMA1Q8ND90 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PNMA1Q8ND90 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.31■■□□□ 1.64
PNMA1Q8ND90 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PNMA1Q8ND90 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25.31■■□□□ 1.64
PNMA1Q8ND90 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.31■■□□□ 1.64
PNMA1Q8ND90 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
PNMA1Q8ND90 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PNMA1Q8ND90 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PNMA1Q8ND90 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.3■■□□□ 1.64
PNMA1Q8ND90 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
PNMA1Q8ND90 TPRG1LP1-201ENST00000598702 760 ntBASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms