Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC4A11Q8NBS3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC4A11Q8NBS3 GUSBP5-202ENST00000510805 1989 ntBASIC23.15■■□□□ 1.3
SLC4A11Q8NBS3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC4A11Q8NBS3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.15■■□□□ 1.3
SLC4A11Q8NBS3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SLC4A11Q8NBS3 AC079089.2-201ENST00000531211 1277 ntBASIC23.15■■□□□ 1.3
SLC4A11Q8NBS3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.15■■□□□ 1.3
SLC4A11Q8NBS3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SLC4A11Q8NBS3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC4A11Q8NBS3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC4A11Q8NBS3 AC139530.1-201ENST00000575312 1977 ntBASIC23.14■■□□□ 1.3
SLC4A11Q8NBS3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.14■■□□□ 1.3
SLC4A11Q8NBS3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.14■■□□□ 1.29
SLC4A11Q8NBS3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SLC4A11Q8NBS3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
SLC4A11Q8NBS3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC4A11Q8NBS3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC4A11Q8NBS3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC4A11Q8NBS3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.14■■□□□ 1.29
SLC4A11Q8NBS3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SLC4A11Q8NBS3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.13■■□□□ 1.29
SLC4A11Q8NBS3 LINC00526-201ENST00000581067 1875 ntBASIC23.13■■□□□ 1.29
SLC4A11Q8NBS3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC4A11Q8NBS3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC4A11Q8NBS3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.13■■□□□ 1.29
SLC4A11Q8NBS3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.13■■□□□ 1.29
SLC4A11Q8NBS3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.13■■□□□ 1.29
SLC4A11Q8NBS3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC4A11Q8NBS3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC4A11Q8NBS3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC4A11Q8NBS3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
SLC4A11Q8NBS3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC4A11Q8NBS3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC4A11Q8NBS3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC4A11Q8NBS3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC4A11Q8NBS3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC4A11Q8NBS3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC4A11Q8NBS3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
SLC4A11Q8NBS3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC4A11Q8NBS3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC4A11Q8NBS3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC4A11Q8NBS3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.11■■□□□ 1.29
SLC4A11Q8NBS3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
SLC4A11Q8NBS3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
SLC4A11Q8NBS3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLC4A11Q8NBS3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.11■■□□□ 1.29
SLC4A11Q8NBS3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC4A11Q8NBS3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.11■■□□□ 1.29
SLC4A11Q8NBS3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SLC4A11Q8NBS3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC4A11Q8NBS3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SLC4A11Q8NBS3 MIR572-201ENST00000384983 95 ntBASIC23.1■■□□□ 1.29
SLC4A11Q8NBS3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SLC4A11Q8NBS3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
SLC4A11Q8NBS3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.1■■□□□ 1.29
SLC4A11Q8NBS3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.1■■□□□ 1.29
SLC4A11Q8NBS3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC4A11Q8NBS3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC4A11Q8NBS3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SLC4A11Q8NBS3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.1■■□□□ 1.29
SLC4A11Q8NBS3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC4A11Q8NBS3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC4A11Q8NBS3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC4A11Q8NBS3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC4A11Q8NBS3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.09■■□□□ 1.29
SLC4A11Q8NBS3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC4A11Q8NBS3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.09■■□□□ 1.29
SLC4A11Q8NBS3 ZNRF2P3-201ENST00000424200 374 ntBASIC23.09■■□□□ 1.29
SLC4A11Q8NBS3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.09■■□□□ 1.29
SLC4A11Q8NBS3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.09■■□□□ 1.29
SLC4A11Q8NBS3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SLC4A11Q8NBS3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC4A11Q8NBS3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC4A11Q8NBS3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC4A11Q8NBS3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SLC4A11Q8NBS3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.08■■□□□ 1.29
SLC4A11Q8NBS3 AC242852.2-201ENST00000615738 1807 ntBASIC23.08■■□□□ 1.29
SLC4A11Q8NBS3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.08■■□□□ 1.29
SLC4A11Q8NBS3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SLC4A11Q8NBS3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.08■■□□□ 1.29
SLC4A11Q8NBS3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.08■■□□□ 1.29
SLC4A11Q8NBS3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SLC4A11Q8NBS3 AL117328.2-201ENST00000624617 1940 ntBASIC23.08■■□□□ 1.28
SLC4A11Q8NBS3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SLC4A11Q8NBS3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC4A11Q8NBS3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC4A11Q8NBS3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.07■■□□□ 1.28
SLC4A11Q8NBS3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.07■■□□□ 1.28
SLC4A11Q8NBS3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC4A11Q8NBS3 SMUG1P1-201ENST00000590640 811 ntBASIC23.07■■□□□ 1.28
SLC4A11Q8NBS3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC4A11Q8NBS3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC4A11Q8NBS3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC4A11Q8NBS3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.06■■□□□ 1.28
SLC4A11Q8NBS3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.06■■□□□ 1.28
SLC4A11Q8NBS3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.06■■□□□ 1.28
SLC4A11Q8NBS3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC4A11Q8NBS3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC4A11Q8NBS3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms