Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00528Q8N1L1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00528Q8N1L1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00528Q8N1L1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00528Q8N1L1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00528Q8N1L1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 H19-210ENST00000439725 1929 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 AC233992.3-201ENST00000607491 485 ntBASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
LINC00528Q8N1L1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 AC242852.2-201ENST00000615738 1807 ntBASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00528Q8N1L1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 WWC2-AS2-201ENST00000578387 2183 ntBASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 BX842568.3-201ENST00000418104 571 ntBASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC14.18□□□□□ -0.14
LINC00528Q8N1L1 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 ESRRAP2-201ENST00000418437 1549 ntBASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 MIR3181-201ENST00000578512 73 ntBASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 AC126544.1-201ENST00000580842 1059 ntBASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LINC00528Q8N1L1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms