Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC44A2Q8IWA5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC44A2Q8IWA5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC44A2Q8IWA5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SLC44A2Q8IWA5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC44A2Q8IWA5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 AC080038.3-201ENST00000623346 1952 ntBASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 AL136116.3-201ENST00000402907 1138 ntBASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 AC006455.2-201ENST00000429931 906 ntBASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SLC44A2Q8IWA5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC44A2Q8IWA5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC44A2Q8IWA5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC44A2Q8IWA5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
SLC44A2Q8IWA5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC44A2Q8IWA5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC44A2Q8IWA5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC44A2Q8IWA5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC44A2Q8IWA5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC44A2Q8IWA5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SLC44A2Q8IWA5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.58■□□□□ 0.88
SLC44A2Q8IWA5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC44A2Q8IWA5 AC087742.1-201ENST00000575880 1738 ntBASIC20.58■□□□□ 0.88
SLC44A2Q8IWA5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLC44A2Q8IWA5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC44A2Q8IWA5 AC008406.3-201ENST00000620001 1374 ntBASIC20.58■□□□□ 0.88
SLC44A2Q8IWA5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
SLC44A2Q8IWA5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC44A2Q8IWA5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC44A2Q8IWA5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC44A2Q8IWA5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC44A2Q8IWA5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
SLC44A2Q8IWA5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC44A2Q8IWA5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC44A2Q8IWA5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC44A2Q8IWA5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC44A2Q8IWA5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC44A2Q8IWA5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC44A2Q8IWA5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC44A2Q8IWA5 AC092171.4-201ENST00000609130 632 ntBASIC20.57■□□□□ 0.88
SLC44A2Q8IWA5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC44A2Q8IWA5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SLC44A2Q8IWA5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
SLC44A2Q8IWA5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC44A2Q8IWA5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC44A2Q8IWA5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC44A2Q8IWA5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
SLC44A2Q8IWA5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
SLC44A2Q8IWA5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC44A2Q8IWA5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC44A2Q8IWA5 AC004687.1-201ENST00000579003 1625 ntBASIC20.56■□□□□ 0.88
SLC44A2Q8IWA5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC44A2Q8IWA5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC44A2Q8IWA5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 pRNA.6-201ENST00000610482 90 ntBASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 pRNA.5-201ENST00000612139 90 ntBASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 pRNA.11-201ENST00000618423 90 ntBASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 pRNA.13-201ENST00000619112 90 ntBASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC44A2Q8IWA5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLC44A2Q8IWA5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC44A2Q8IWA5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLC44A2Q8IWA5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC44A2Q8IWA5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SLC44A2Q8IWA5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC44A2Q8IWA5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC44A2Q8IWA5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC44A2Q8IWA5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC44A2Q8IWA5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC44A2Q8IWA5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC44A2Q8IWA5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SLC44A2Q8IWA5 LINC01960-201ENST00000563759 1884 ntBASIC20.54■□□□□ 0.88
SLC44A2Q8IWA5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms