Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CROCCP3Q8IVE0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP3Q8IVE0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CROCCP3Q8IVE0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP3Q8IVE0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CROCCP3Q8IVE0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP3Q8IVE0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP3Q8IVE0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP3Q8IVE0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.67■□□□□ 0.74
CROCCP3Q8IVE0 AC060814.1-201ENST00000554326 538 ntBASIC19.67■□□□□ 0.74
CROCCP3Q8IVE0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP3Q8IVE0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.67■□□□□ 0.74
CROCCP3Q8IVE0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CROCCP3Q8IVE0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.67■□□□□ 0.74
CROCCP3Q8IVE0 AC244015.2-201ENST00000616358 1861 ntBASIC19.67■□□□□ 0.74
CROCCP3Q8IVE0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 AC093536.1-201ENST00000569153 554 ntBASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CROCCP3Q8IVE0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 AL022069.1-201ENST00000568025 1636 ntBASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 CR559946.2-201ENST00000623684 991 ntBASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CROCCP3Q8IVE0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.64■□□□□ 0.74
CROCCP3Q8IVE0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CROCCP3Q8IVE0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.64■□□□□ 0.74
CROCCP3Q8IVE0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CROCCP3Q8IVE0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CROCCP3Q8IVE0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.64■□□□□ 0.73
CROCCP3Q8IVE0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.64■□□□□ 0.73
CROCCP3Q8IVE0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CROCCP3Q8IVE0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CROCCP3Q8IVE0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CROCCP3Q8IVE0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.64■□□□□ 0.73
CROCCP3Q8IVE0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CROCCP3Q8IVE0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.64■□□□□ 0.73
CROCCP3Q8IVE0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CROCCP3Q8IVE0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CROCCP3Q8IVE0 AC087289.5-201ENST00000586076 3175 ntBASIC19.64■□□□□ 0.73
CROCCP3Q8IVE0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CROCCP3Q8IVE0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP3Q8IVE0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CROCCP3Q8IVE0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP3Q8IVE0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP3Q8IVE0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CROCCP3Q8IVE0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.63■□□□□ 0.73
CROCCP3Q8IVE0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP3Q8IVE0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.63■□□□□ 0.73
CROCCP3Q8IVE0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.63■□□□□ 0.73
CROCCP3Q8IVE0 AC092296.2-201ENST00000589470 999 ntBASIC19.63■□□□□ 0.73
CROCCP3Q8IVE0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CROCCP3Q8IVE0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CROCCP3Q8IVE0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CROCCP3Q8IVE0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CROCCP3Q8IVE0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms