Protein–RNA interactions for Protein: Q8IUX4

APOBEC3F, DNA dC->dU-editing enzyme APOBEC-3F, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3FQ8IUX4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
APOBEC3FQ8IUX4 MYCNOS-205ENST00000641950 531 ntBASIC25.9■■□□□ 1.74
APOBEC3FQ8IUX4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
APOBEC3FQ8IUX4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
APOBEC3FQ8IUX4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
APOBEC3FQ8IUX4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC25.89■■□□□ 1.74
APOBEC3FQ8IUX4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
APOBEC3FQ8IUX4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
APOBEC3FQ8IUX4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
APOBEC3FQ8IUX4 AL138781.1-201ENST00000566567 1274 ntBASIC25.89■■□□□ 1.74
APOBEC3FQ8IUX4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
APOBEC3FQ8IUX4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.89■■□□□ 1.74
APOBEC3FQ8IUX4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC25.89■■□□□ 1.74
APOBEC3FQ8IUX4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.89■■□□□ 1.74
APOBEC3FQ8IUX4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
APOBEC3FQ8IUX4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
APOBEC3FQ8IUX4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
APOBEC3FQ8IUX4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
APOBEC3FQ8IUX4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.88■■□□□ 1.73
APOBEC3FQ8IUX4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
APOBEC3FQ8IUX4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
APOBEC3FQ8IUX4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC25.88■■□□□ 1.73
APOBEC3FQ8IUX4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC25.88■■□□□ 1.73
APOBEC3FQ8IUX4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
APOBEC3FQ8IUX4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.88■■□□□ 1.73
APOBEC3FQ8IUX4 LINC00543-201ENST00000567234 1845 ntBASIC25.88■■□□□ 1.73
APOBEC3FQ8IUX4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
APOBEC3FQ8IUX4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
APOBEC3FQ8IUX4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
APOBEC3FQ8IUX4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
APOBEC3FQ8IUX4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
APOBEC3FQ8IUX4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
APOBEC3FQ8IUX4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
APOBEC3FQ8IUX4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
APOBEC3FQ8IUX4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.87■■□□□ 1.73
APOBEC3FQ8IUX4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.87■■□□□ 1.73
APOBEC3FQ8IUX4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.87■■□□□ 1.73
APOBEC3FQ8IUX4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC25.87■■□□□ 1.73
APOBEC3FQ8IUX4 AP001160.3-201ENST00000601484 763 ntBASIC25.87■■□□□ 1.73
APOBEC3FQ8IUX4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
APOBEC3FQ8IUX4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
APOBEC3FQ8IUX4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
APOBEC3FQ8IUX4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
APOBEC3FQ8IUX4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
APOBEC3FQ8IUX4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC25.86■■□□□ 1.73
APOBEC3FQ8IUX4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC25.86■■□□□ 1.73
APOBEC3FQ8IUX4 DUSP8P3-201ENST00000399571 1760 ntBASIC25.86■■□□□ 1.73
APOBEC3FQ8IUX4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
APOBEC3FQ8IUX4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.86■■□□□ 1.73
APOBEC3FQ8IUX4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
APOBEC3FQ8IUX4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
APOBEC3FQ8IUX4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
APOBEC3FQ8IUX4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC25.85■■□□□ 1.73
APOBEC3FQ8IUX4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC25.85■■□□□ 1.73
APOBEC3FQ8IUX4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
APOBEC3FQ8IUX4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
APOBEC3FQ8IUX4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
APOBEC3FQ8IUX4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
APOBEC3FQ8IUX4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
APOBEC3FQ8IUX4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.85■■□□□ 1.73
APOBEC3FQ8IUX4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
APOBEC3FQ8IUX4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
APOBEC3FQ8IUX4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
APOBEC3FQ8IUX4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.84■■□□□ 1.73
APOBEC3FQ8IUX4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
APOBEC3FQ8IUX4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
APOBEC3FQ8IUX4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
APOBEC3FQ8IUX4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
APOBEC3FQ8IUX4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
APOBEC3FQ8IUX4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
APOBEC3FQ8IUX4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
APOBEC3FQ8IUX4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
APOBEC3FQ8IUX4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.83■■□□□ 1.73
APOBEC3FQ8IUX4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
APOBEC3FQ8IUX4 AC069152.1-201ENST00000438030 544 ntBASIC25.83■■□□□ 1.73
APOBEC3FQ8IUX4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
APOBEC3FQ8IUX4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
APOBEC3FQ8IUX4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
APOBEC3FQ8IUX4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
APOBEC3FQ8IUX4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.82■■□□□ 1.72
APOBEC3FQ8IUX4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
APOBEC3FQ8IUX4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
APOBEC3FQ8IUX4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
APOBEC3FQ8IUX4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
APOBEC3FQ8IUX4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.82■■□□□ 1.72
APOBEC3FQ8IUX4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.81■■□□□ 1.72
APOBEC3FQ8IUX4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
APOBEC3FQ8IUX4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.81■■□□□ 1.72
APOBEC3FQ8IUX4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
APOBEC3FQ8IUX4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.81■■□□□ 1.72
APOBEC3FQ8IUX4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
APOBEC3FQ8IUX4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.81■■□□□ 1.72
APOBEC3FQ8IUX4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
APOBEC3FQ8IUX4 AF201337.1-201ENST00000520239 748 ntBASIC25.81■■□□□ 1.72
APOBEC3FQ8IUX4 AC133041.1-202ENST00000642053 222 ntBASIC25.81■■□□□ 1.72
APOBEC3FQ8IUX4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
APOBEC3FQ8IUX4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.81■■□□□ 1.72
APOBEC3FQ8IUX4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.81■■□□□ 1.72
APOBEC3FQ8IUX4 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.8■■□□□ 1.72
APOBEC3FQ8IUX4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms