Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ZC3HC1Q86WB0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.65■■□□□ 1.06
ZC3HC1Q86WB0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZC3HC1Q86WB0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ZC3HC1Q86WB0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.65■■□□□ 1.06
ZC3HC1Q86WB0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
ZC3HC1Q86WB0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
ZC3HC1Q86WB0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
ZC3HC1Q86WB0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ZC3HC1Q86WB0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ZC3HC1Q86WB0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.64■■□□□ 1.06
ZC3HC1Q86WB0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
ZC3HC1Q86WB0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ZC3HC1Q86WB0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
ZC3HC1Q86WB0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZC3HC1Q86WB0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.64■■□□□ 1.05
ZC3HC1Q86WB0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZC3HC1Q86WB0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZC3HC1Q86WB0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZC3HC1Q86WB0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZC3HC1Q86WB0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.63■■□□□ 1.05
ZC3HC1Q86WB0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZC3HC1Q86WB0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.63■■□□□ 1.05
ZC3HC1Q86WB0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.63■■□□□ 1.05
ZC3HC1Q86WB0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZC3HC1Q86WB0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
ZC3HC1Q86WB0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
ZC3HC1Q86WB0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.63■■□□□ 1.05
ZC3HC1Q86WB0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.63■■□□□ 1.05
ZC3HC1Q86WB0 FAM99A-202ENST00000538190 1989 ntBASIC21.63■■□□□ 1.05
ZC3HC1Q86WB0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZC3HC1Q86WB0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ZC3HC1Q86WB0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
ZC3HC1Q86WB0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZC3HC1Q86WB0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3HC1Q86WB0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3HC1Q86WB0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3HC1Q86WB0 MIR3181-201ENST00000578512 73 ntBASIC21.62■■□□□ 1.05
ZC3HC1Q86WB0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3HC1Q86WB0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3HC1Q86WB0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3HC1Q86WB0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.62■■□□□ 1.05
ZC3HC1Q86WB0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3HC1Q86WB0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.62■■□□□ 1.05
ZC3HC1Q86WB0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZC3HC1Q86WB0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZC3HC1Q86WB0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.61■■□□□ 1.05
ZC3HC1Q86WB0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.61■■□□□ 1.05
ZC3HC1Q86WB0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.61■■□□□ 1.05
ZC3HC1Q86WB0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZC3HC1Q86WB0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
ZC3HC1Q86WB0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZC3HC1Q86WB0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZC3HC1Q86WB0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.61■■□□□ 1.05
ZC3HC1Q86WB0 AL512631.2-201ENST00000604634 923 ntBASIC21.61■■□□□ 1.05
ZC3HC1Q86WB0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
ZC3HC1Q86WB0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZC3HC1Q86WB0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
ZC3HC1Q86WB0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.61■■□□□ 1.05
ZC3HC1Q86WB0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZC3HC1Q86WB0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZC3HC1Q86WB0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZC3HC1Q86WB0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZC3HC1Q86WB0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZC3HC1Q86WB0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.6■■□□□ 1.05
ZC3HC1Q86WB0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
ZC3HC1Q86WB0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.6■■□□□ 1.05
ZC3HC1Q86WB0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.6■■□□□ 1.05
ZC3HC1Q86WB0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZC3HC1Q86WB0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZC3HC1Q86WB0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
ZC3HC1Q86WB0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3HC1Q86WB0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3HC1Q86WB0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ZC3HC1Q86WB0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.59■■□□□ 1.05
ZC3HC1Q86WB0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3HC1Q86WB0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3HC1Q86WB0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3HC1Q86WB0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3HC1Q86WB0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.59■■□□□ 1.05
ZC3HC1Q86WB0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZC3HC1Q86WB0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.59■■□□□ 1.05
ZC3HC1Q86WB0 AL137060.1-201ENST00000618151 2648 ntBASIC21.59■■□□□ 1.05
ZC3HC1Q86WB0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
ZC3HC1Q86WB0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZC3HC1Q86WB0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ZC3HC1Q86WB0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
ZC3HC1Q86WB0 SRD5A1P1-201ENST00000442297 786 ntBASIC21.58■■□□□ 1.05
ZC3HC1Q86WB0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ZC3HC1Q86WB0 AC079089.2-201ENST00000531211 1277 ntBASIC21.58■■□□□ 1.05
ZC3HC1Q86WB0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.58■■□□□ 1.04
ZC3HC1Q86WB0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZC3HC1Q86WB0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZC3HC1Q86WB0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZC3HC1Q86WB0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.58■■□□□ 1.04
ZC3HC1Q86WB0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZC3HC1Q86WB0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.58■■□□□ 1.04
ZC3HC1Q86WB0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.57■■□□□ 1.04
ZC3HC1Q86WB0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZC3HC1Q86WB0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms