Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC27.67■■■□□ 2.02
COPS6Q7L5N1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
COPS6Q7L5N1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
COPS6Q7L5N1 LINC01960-201ENST00000563759 1884 ntBASIC27.66■■■□□ 2.02
COPS6Q7L5N1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
COPS6Q7L5N1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
COPS6Q7L5N1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC27.66■■■□□ 2.02
COPS6Q7L5N1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
COPS6Q7L5N1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
COPS6Q7L5N1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC27.66■■■□□ 2.02
COPS6Q7L5N1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC27.66■■■□□ 2.02
COPS6Q7L5N1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
COPS6Q7L5N1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC27.66■■■□□ 2.02
COPS6Q7L5N1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
COPS6Q7L5N1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC27.65■■■□□ 2.02
COPS6Q7L5N1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.65■■■□□ 2.02
COPS6Q7L5N1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC27.65■■■□□ 2.02
COPS6Q7L5N1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC27.65■■■□□ 2.02
COPS6Q7L5N1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC27.65■■■□□ 2.02
COPS6Q7L5N1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC27.65■■■□□ 2.02
COPS6Q7L5N1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC27.65■■■□□ 2.02
COPS6Q7L5N1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COPS6Q7L5N1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
COPS6Q7L5N1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC27.64■■■□□ 2.02
COPS6Q7L5N1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC27.64■■■□□ 2.02
COPS6Q7L5N1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC27.64■■■□□ 2.02
COPS6Q7L5N1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
COPS6Q7L5N1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC27.64■■■□□ 2.01
COPS6Q7L5N1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC27.64■■■□□ 2.01
COPS6Q7L5N1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COPS6Q7L5N1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC27.63■■■□□ 2.01
COPS6Q7L5N1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC27.63■■■□□ 2.01
COPS6Q7L5N1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COPS6Q7L5N1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC27.63■■■□□ 2.01
COPS6Q7L5N1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC27.63■■■□□ 2.01
COPS6Q7L5N1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC27.63■■■□□ 2.01
COPS6Q7L5N1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC27.63■■■□□ 2.01
COPS6Q7L5N1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COPS6Q7L5N1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
COPS6Q7L5N1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
COPS6Q7L5N1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
COPS6Q7L5N1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
COPS6Q7L5N1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
COPS6Q7L5N1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
COPS6Q7L5N1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC27.62■■■□□ 2.01
COPS6Q7L5N1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC27.62■■■□□ 2.01
COPS6Q7L5N1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC27.62■■■□□ 2.01
COPS6Q7L5N1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
COPS6Q7L5N1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
COPS6Q7L5N1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC27.61■■■□□ 2.01
COPS6Q7L5N1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
COPS6Q7L5N1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
COPS6Q7L5N1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
COPS6Q7L5N1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC27.6■■■□□ 2.01
COPS6Q7L5N1 AC006015.1-201ENST00000429970 570 ntBASIC27.6■■■□□ 2.01
COPS6Q7L5N1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
COPS6Q7L5N1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC27.6■■■□□ 2.01
COPS6Q7L5N1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
COPS6Q7L5N1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
COPS6Q7L5N1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
COPS6Q7L5N1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
COPS6Q7L5N1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
COPS6Q7L5N1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
COPS6Q7L5N1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
COPS6Q7L5N1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC27.59■■■□□ 2.01
COPS6Q7L5N1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC27.59■■■□□ 2.01
COPS6Q7L5N1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC27.59■■■□□ 2.01
COPS6Q7L5N1 AC079089.2-201ENST00000531211 1277 ntBASIC27.59■■■□□ 2.01
COPS6Q7L5N1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC27.59■■■□□ 2.01
COPS6Q7L5N1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
COPS6Q7L5N1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
COPS6Q7L5N1 AC005224.4-201ENST00000583262 1652 ntBASIC27.59■■■□□ 2.01
COPS6Q7L5N1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
COPS6Q7L5N1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC27.58■■■□□ 2.01
COPS6Q7L5N1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COPS6Q7L5N1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC27.58■■■□□ 2.01
COPS6Q7L5N1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC27.58■■■□□ 2.01
COPS6Q7L5N1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC27.58■■■□□ 2.01
COPS6Q7L5N1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC27.58■■■□□ 2.01
COPS6Q7L5N1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC27.58■■■□□ 2.01
COPS6Q7L5N1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
COPS6Q7L5N1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COPS6Q7L5N1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
COPS6Q7L5N1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
COPS6Q7L5N1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC27.58■■■□□ 2
COPS6Q7L5N1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
COPS6Q7L5N1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
COPS6Q7L5N1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
COPS6Q7L5N1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC27.57■■■□□ 2
COPS6Q7L5N1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC27.57■■■□□ 2
COPS6Q7L5N1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC27.57■■■□□ 2
COPS6Q7L5N1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC27.57■■■□□ 2
COPS6Q7L5N1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC27.57■■■□□ 2
COPS6Q7L5N1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC27.56■■■□□ 2
COPS6Q7L5N1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC27.56■■■□□ 2
COPS6Q7L5N1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
COPS6Q7L5N1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC27.56■■■□□ 2
COPS6Q7L5N1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC27.56■■■□□ 2
COPS6Q7L5N1 DBI-210ENST00000542275 757 ntTSL 5 BASIC27.56■■■□□ 2
COPS6Q7L5N1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC27.56■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms