Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
C11orf88Q6PI97 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.8■□□□□ 0.6
C11orf88Q6PI97 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
C11orf88Q6PI97 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
C11orf88Q6PI97 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.8■□□□□ 0.6
C11orf88Q6PI97 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.8■□□□□ 0.6
C11orf88Q6PI97 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C11orf88Q6PI97 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.8■□□□□ 0.6
C11orf88Q6PI97 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C11orf88Q6PI97 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
C11orf88Q6PI97 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
C11orf88Q6PI97 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
C11orf88Q6PI97 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.77■□□□□ 0.6
C11orf88Q6PI97 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C11orf88Q6PI97 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.77■□□□□ 0.6
C11orf88Q6PI97 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C11orf88Q6PI97 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
C11orf88Q6PI97 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
C11orf88Q6PI97 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.77■□□□□ 0.6
C11orf88Q6PI97 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
C11orf88Q6PI97 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.77■□□□□ 0.6
C11orf88Q6PI97 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
C11orf88Q6PI97 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.77■□□□□ 0.6
C11orf88Q6PI97 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.77■□□□□ 0.6
C11orf88Q6PI97 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
C11orf88Q6PI97 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
C11orf88Q6PI97 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
C11orf88Q6PI97 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
C11orf88Q6PI97 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C11orf88Q6PI97 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C11orf88Q6PI97 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
C11orf88Q6PI97 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C11orf88Q6PI97 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
C11orf88Q6PI97 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.76■□□□□ 0.59
C11orf88Q6PI97 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
C11orf88Q6PI97 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.76■□□□□ 0.59
C11orf88Q6PI97 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
C11orf88Q6PI97 AC137630.3-201ENST00000607245 391 ntBASIC18.76■□□□□ 0.59
C11orf88Q6PI97 MIR4787-201ENST00000607364 84 ntBASIC18.76■□□□□ 0.59
C11orf88Q6PI97 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
C11orf88Q6PI97 AC090877.2-201ENST00000558441 1738 ntBASIC18.76■□□□□ 0.59
C11orf88Q6PI97 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
C11orf88Q6PI97 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
C11orf88Q6PI97 AL121603.2-201ENST00000557373 2117 ntBASIC18.76■□□□□ 0.59
C11orf88Q6PI97 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
C11orf88Q6PI97 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.75■□□□□ 0.59
C11orf88Q6PI97 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
C11orf88Q6PI97 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.75■□□□□ 0.59
C11orf88Q6PI97 AL022069.1-201ENST00000568025 1636 ntBASIC18.75■□□□□ 0.59
C11orf88Q6PI97 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
C11orf88Q6PI97 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
C11orf88Q6PI97 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
C11orf88Q6PI97 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
C11orf88Q6PI97 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
C11orf88Q6PI97 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
C11orf88Q6PI97 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.75■□□□□ 0.59
C11orf88Q6PI97 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms