Protein–RNA interactions for Protein: Q5VVW2

GARNL3, GTPase-activating Rap/Ran-GAP domain-like protein 3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3Q5VVW2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.71■□□□□ 0.91
GARNL3Q5VVW2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GARNL3Q5VVW2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GARNL3Q5VVW2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
GARNL3Q5VVW2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
GARNL3Q5VVW2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GARNL3Q5VVW2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.7■□□□□ 0.91
GARNL3Q5VVW2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GARNL3Q5VVW2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.7■□□□□ 0.9
GARNL3Q5VVW2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.7■□□□□ 0.9
GARNL3Q5VVW2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
GARNL3Q5VVW2 AC105233.4-201ENST00000642045 216 ntBASIC20.7■□□□□ 0.9
GARNL3Q5VVW2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.7■□□□□ 0.9
GARNL3Q5VVW2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GARNL3Q5VVW2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
GARNL3Q5VVW2 C9orf163-202ENST00000624034 2573 ntBASIC20.7■□□□□ 0.9
GARNL3Q5VVW2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.69■□□□□ 0.9
GARNL3Q5VVW2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GARNL3Q5VVW2 AC079834.2-201ENST00000609776 1949 ntBASIC20.68■□□□□ 0.9
GARNL3Q5VVW2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
GARNL3Q5VVW2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.68■□□□□ 0.9
GARNL3Q5VVW2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GARNL3Q5VVW2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.68■□□□□ 0.9
GARNL3Q5VVW2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GARNL3Q5VVW2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.68■□□□□ 0.9
GARNL3Q5VVW2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.68■□□□□ 0.9
GARNL3Q5VVW2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GARNL3Q5VVW2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.68■□□□□ 0.9
GARNL3Q5VVW2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GARNL3Q5VVW2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GARNL3Q5VVW2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GARNL3Q5VVW2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GARNL3Q5VVW2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GARNL3Q5VVW2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
GARNL3Q5VVW2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GARNL3Q5VVW2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GARNL3Q5VVW2 AC027612.3-201ENST00000413684 1047 ntBASIC20.67■□□□□ 0.9
GARNL3Q5VVW2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GARNL3Q5VVW2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.67■□□□□ 0.9
GARNL3Q5VVW2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GARNL3Q5VVW2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.67■□□□□ 0.9
GARNL3Q5VVW2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GARNL3Q5VVW2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.67■□□□□ 0.9
GARNL3Q5VVW2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GARNL3Q5VVW2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
GARNL3Q5VVW2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GARNL3Q5VVW2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GARNL3Q5VVW2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.66■□□□□ 0.9
GARNL3Q5VVW2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.66■□□□□ 0.9
GARNL3Q5VVW2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.66■□□□□ 0.9
GARNL3Q5VVW2 RARRES2P6-201ENST00000567333 442 ntBASIC20.66■□□□□ 0.9
GARNL3Q5VVW2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.66■□□□□ 0.9
GARNL3Q5VVW2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
GARNL3Q5VVW2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.66■□□□□ 0.9
GARNL3Q5VVW2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GARNL3Q5VVW2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GARNL3Q5VVW2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
GARNL3Q5VVW2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.66■□□□□ 0.9
GARNL3Q5VVW2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
GARNL3Q5VVW2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GARNL3Q5VVW2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GARNL3Q5VVW2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.65■□□□□ 0.9
GARNL3Q5VVW2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
GARNL3Q5VVW2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GARNL3Q5VVW2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
GARNL3Q5VVW2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
GARNL3Q5VVW2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GARNL3Q5VVW2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.65■□□□□ 0.9
GARNL3Q5VVW2 AC079089.2-201ENST00000531211 1277 ntBASIC20.65■□□□□ 0.9
GARNL3Q5VVW2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.65■□□□□ 0.9
GARNL3Q5VVW2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GARNL3Q5VVW2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
GARNL3Q5VVW2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.64■□□□□ 0.89
GARNL3Q5VVW2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GARNL3Q5VVW2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GARNL3Q5VVW2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
GARNL3Q5VVW2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
GARNL3Q5VVW2 AC097381.1-201ENST00000429019 1296 ntBASIC20.64■□□□□ 0.89
GARNL3Q5VVW2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.64■□□□□ 0.89
GARNL3Q5VVW2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GARNL3Q5VVW2 MIR6821-201ENST00000617625 74 ntBASIC20.64■□□□□ 0.89
GARNL3Q5VVW2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.89
GARNL3Q5VVW2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms