Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPS13DQ5THJ4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
VPS13DQ5THJ4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
VPS13DQ5THJ4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
VPS13DQ5THJ4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.85□□□□□ -0.03
VPS13DQ5THJ4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13DQ5THJ4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13DQ5THJ4 AC104187.1-201ENST00000607510 612 ntBASIC14.84□□□□□ -0.03
VPS13DQ5THJ4 AL353803.4-201ENST00000565882 1934 ntBASIC14.84□□□□□ -0.03
VPS13DQ5THJ4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13DQ5THJ4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS13DQ5THJ4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.84□□□□□ -0.03
VPS13DQ5THJ4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13DQ5THJ4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13DQ5THJ4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VPS13DQ5THJ4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
VPS13DQ5THJ4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13DQ5THJ4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13DQ5THJ4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC14.84□□□□□ -0.03
VPS13DQ5THJ4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPS13DQ5THJ4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS13DQ5THJ4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS13DQ5THJ4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
VPS13DQ5THJ4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VPS13DQ5THJ4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
VPS13DQ5THJ4 EED-207ENST00000528180 1745 ntTSL 5 BASIC14.83□□□□□ -0.03
VPS13DQ5THJ4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13DQ5THJ4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13DQ5THJ4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13DQ5THJ4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13DQ5THJ4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13DQ5THJ4 AC083906.2-201ENST00000511578 360 ntBASIC14.83□□□□□ -0.04
VPS13DQ5THJ4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.83□□□□□ -0.04
VPS13DQ5THJ4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC14.83□□□□□ -0.04
VPS13DQ5THJ4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
VPS13DQ5THJ4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13DQ5THJ4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13DQ5THJ4 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.83□□□□□ -0.04
VPS13DQ5THJ4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VPS13DQ5THJ4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
VPS13DQ5THJ4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 CD99P1-205ENST00000527459 561 ntBASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 AC079140.4-201ENST00000507448 529 ntBASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 AC142381.3-201ENST00000568208 1670 ntBASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VPS13DQ5THJ4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13DQ5THJ4 AC055733.4-201ENST00000638462 1354 ntBASIC14.81□□□□□ -0.04
VPS13DQ5THJ4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13DQ5THJ4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.81□□□□□ -0.04
VPS13DQ5THJ4 AC098590.1-201ENST00000468126 897 ntBASIC14.81□□□□□ -0.04
VPS13DQ5THJ4 AF201337.1-201ENST00000520239 748 ntBASIC14.81□□□□□ -0.04
VPS13DQ5THJ4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.81□□□□□ -0.04
VPS13DQ5THJ4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC14.81□□□□□ -0.04
VPS13DQ5THJ4 AC009237.3-201ENST00000393279 1427 ntBASIC14.81□□□□□ -0.04
VPS13DQ5THJ4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.81□□□□□ -0.04
VPS13DQ5THJ4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13DQ5THJ4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.81□□□□□ -0.04
VPS13DQ5THJ4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC14.81□□□□□ -0.04
VPS13DQ5THJ4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.81□□□□□ -0.04
VPS13DQ5THJ4 AC005224.4-201ENST00000583262 1652 ntBASIC14.81□□□□□ -0.04
VPS13DQ5THJ4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS13DQ5THJ4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS13DQ5THJ4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms