Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARFGEF3Q5TH69 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARFGEF3Q5TH69 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
ARFGEF3Q5TH69 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARFGEF3Q5TH69 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ARFGEF3Q5TH69 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.52■□□□□ 0.56
ARFGEF3Q5TH69 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ARFGEF3Q5TH69 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.52■□□□□ 0.56
ARFGEF3Q5TH69 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ARFGEF3Q5TH69 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.52■□□□□ 0.55
ARFGEF3Q5TH69 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ARFGEF3Q5TH69 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ARFGEF3Q5TH69 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.51■□□□□ 0.55
ARFGEF3Q5TH69 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ARFGEF3Q5TH69 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.51■□□□□ 0.55
ARFGEF3Q5TH69 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ARFGEF3Q5TH69 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ARFGEF3Q5TH69 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.51■□□□□ 0.55
ARFGEF3Q5TH69 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.51■□□□□ 0.55
ARFGEF3Q5TH69 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.51■□□□□ 0.55
ARFGEF3Q5TH69 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ARFGEF3Q5TH69 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.51■□□□□ 0.55
ARFGEF3Q5TH69 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ARFGEF3Q5TH69 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ARFGEF3Q5TH69 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ARFGEF3Q5TH69 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ARFGEF3Q5TH69 AC010141.3-201ENST00000456659 717 ntBASIC18.51■□□□□ 0.55
ARFGEF3Q5TH69 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARFGEF3Q5TH69 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARFGEF3Q5TH69 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.5■□□□□ 0.55
ARFGEF3Q5TH69 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ARFGEF3Q5TH69 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ARFGEF3Q5TH69 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
ARFGEF3Q5TH69 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARFGEF3Q5TH69 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARFGEF3Q5TH69 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
ARFGEF3Q5TH69 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARFGEF3Q5TH69 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARFGEF3Q5TH69 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARFGEF3Q5TH69 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARFGEF3Q5TH69 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.5■□□□□ 0.55
ARFGEF3Q5TH69 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ARFGEF3Q5TH69 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ARFGEF3Q5TH69 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.5■□□□□ 0.55
ARFGEF3Q5TH69 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 AP004607.4-201ENST00000530158 1459 ntBASIC18.49■□□□□ 0.55
ARFGEF3Q5TH69 AC004854.2-201ENST00000608450 1441 ntBASIC18.48■□□□□ 0.55
ARFGEF3Q5TH69 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARFGEF3Q5TH69 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.48■□□□□ 0.55
ARFGEF3Q5TH69 NTF6G-201ENST00000591094 616 ntBASIC18.48■□□□□ 0.55
ARFGEF3Q5TH69 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARFGEF3Q5TH69 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.48■□□□□ 0.55
ARFGEF3Q5TH69 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARFGEF3Q5TH69 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARFGEF3Q5TH69 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ARFGEF3Q5TH69 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ARFGEF3Q5TH69 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.48■□□□□ 0.55
ARFGEF3Q5TH69 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.48■□□□□ 0.55
ARFGEF3Q5TH69 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ARFGEF3Q5TH69 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ARFGEF3Q5TH69 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 AL137784.2-201ENST00000607332 1000 ntBASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 C9orf163-202ENST00000624034 2573 ntBASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.47■□□□□ 0.55
ARFGEF3Q5TH69 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARFGEF3Q5TH69 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARFGEF3Q5TH69 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ARFGEF3Q5TH69 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ARFGEF3Q5TH69 AC005224.4-201ENST00000583262 1652 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms