Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.1■□□□□ 0.97
SGO1Q5FBB7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SGO1Q5FBB7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SGO1Q5FBB7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SGO1Q5FBB7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.1■□□□□ 0.97
SGO1Q5FBB7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SGO1Q5FBB7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.1■□□□□ 0.97
SGO1Q5FBB7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.1■□□□□ 0.97
SGO1Q5FBB7 pRNA.6-201ENST00000610482 90 ntBASIC21.1■□□□□ 0.97
SGO1Q5FBB7 pRNA.5-201ENST00000612139 90 ntBASIC21.1■□□□□ 0.97
SGO1Q5FBB7 pRNA.11-201ENST00000618423 90 ntBASIC21.1■□□□□ 0.97
SGO1Q5FBB7 pRNA.13-201ENST00000619112 90 ntBASIC21.1■□□□□ 0.97
SGO1Q5FBB7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.1■□□□□ 0.97
SGO1Q5FBB7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SGO1Q5FBB7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.1■□□□□ 0.97
SGO1Q5FBB7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SGO1Q5FBB7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SGO1Q5FBB7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SGO1Q5FBB7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SGO1Q5FBB7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
SGO1Q5FBB7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.09■□□□□ 0.97
SGO1Q5FBB7 AL356441.2-201ENST00000443009 864 ntBASIC21.09■□□□□ 0.97
SGO1Q5FBB7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.09■□□□□ 0.97
SGO1Q5FBB7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SGO1Q5FBB7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SGO1Q5FBB7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.09■□□□□ 0.97
SGO1Q5FBB7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SGO1Q5FBB7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.08■□□□□ 0.97
SGO1Q5FBB7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SGO1Q5FBB7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
SGO1Q5FBB7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SGO1Q5FBB7 AC137767.1-201ENST00000602918 1920 ntBASIC21.08■□□□□ 0.97
SGO1Q5FBB7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SGO1Q5FBB7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SGO1Q5FBB7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SGO1Q5FBB7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
SGO1Q5FBB7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SGO1Q5FBB7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SGO1Q5FBB7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.08■□□□□ 0.97
SGO1Q5FBB7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.08■□□□□ 0.97
SGO1Q5FBB7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SGO1Q5FBB7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.08■□□□□ 0.97
SGO1Q5FBB7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.08■□□□□ 0.96
SGO1Q5FBB7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.08■□□□□ 0.96
SGO1Q5FBB7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SGO1Q5FBB7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.96
SGO1Q5FBB7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.07■□□□□ 0.96
SGO1Q5FBB7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SGO1Q5FBB7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SGO1Q5FBB7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SGO1Q5FBB7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.07■□□□□ 0.96
SGO1Q5FBB7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SGO1Q5FBB7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.07■□□□□ 0.96
SGO1Q5FBB7 AC133637.1-201ENST00000624115 1537 ntBASIC21.07■□□□□ 0.96
SGO1Q5FBB7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SGO1Q5FBB7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SGO1Q5FBB7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.06■□□□□ 0.96
SGO1Q5FBB7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SGO1Q5FBB7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SGO1Q5FBB7 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.06■□□□□ 0.96
SGO1Q5FBB7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SGO1Q5FBB7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SGO1Q5FBB7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SGO1Q5FBB7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.05■□□□□ 0.96
SGO1Q5FBB7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SGO1Q5FBB7 SRD5A1P1-201ENST00000442297 786 ntBASIC21.05■□□□□ 0.96
SGO1Q5FBB7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.05■□□□□ 0.96
SGO1Q5FBB7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SGO1Q5FBB7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SGO1Q5FBB7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SGO1Q5FBB7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SGO1Q5FBB7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SGO1Q5FBB7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SGO1Q5FBB7 FBXW4P1-201ENST00000426721 2239 ntBASIC21.05■□□□□ 0.96
SGO1Q5FBB7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SGO1Q5FBB7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.05■□□□□ 0.96
SGO1Q5FBB7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.04■□□□□ 0.96
SGO1Q5FBB7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.04■□□□□ 0.96
SGO1Q5FBB7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SGO1Q5FBB7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SGO1Q5FBB7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.04■□□□□ 0.96
SGO1Q5FBB7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SGO1Q5FBB7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SGO1Q5FBB7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.04■□□□□ 0.96
SGO1Q5FBB7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.04■□□□□ 0.96
SGO1Q5FBB7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SGO1Q5FBB7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SGO1Q5FBB7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SGO1Q5FBB7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.04■□□□□ 0.96
SGO1Q5FBB7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SGO1Q5FBB7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SGO1Q5FBB7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.04■□□□□ 0.96
SGO1Q5FBB7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SGO1Q5FBB7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SGO1Q5FBB7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SGO1Q5FBB7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SGO1Q5FBB7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SGO1Q5FBB7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.03■□□□□ 0.96
SGO1Q5FBB7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.03■□□□□ 0.96
SGO1Q5FBB7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms