Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC30.12■■■□□ 2.41
CDCA8Q53HL2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC30.12■■■□□ 2.41
CDCA8Q53HL2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC30.12■■■□□ 2.41
CDCA8Q53HL2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CDCA8Q53HL2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CDCA8Q53HL2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CDCA8Q53HL2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC30.11■■■□□ 2.41
CDCA8Q53HL2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC30.11■■■□□ 2.41
CDCA8Q53HL2 ANKRD20A6P-201ENST00000618763 204 ntBASIC30.11■■■□□ 2.41
CDCA8Q53HL2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
CDCA8Q53HL2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CDCA8Q53HL2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CDCA8Q53HL2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC30.11■■■□□ 2.41
CDCA8Q53HL2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CDCA8Q53HL2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDCA8Q53HL2 CCDC92B-201ENST00000575506 885 ntBASIC30.1■■■□□ 2.41
CDCA8Q53HL2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
CDCA8Q53HL2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC30.1■■■□□ 2.41
CDCA8Q53HL2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CDCA8Q53HL2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC30.1■■■□□ 2.41
CDCA8Q53HL2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CDCA8Q53HL2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
CDCA8Q53HL2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
CDCA8Q53HL2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC30.09■■■□□ 2.41
CDCA8Q53HL2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
CDCA8Q53HL2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CDCA8Q53HL2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC30.09■■■□□ 2.41
CDCA8Q53HL2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CDCA8Q53HL2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
CDCA8Q53HL2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CDCA8Q53HL2 AC137767.1-201ENST00000602918 1920 ntBASIC30.08■■■□□ 2.41
CDCA8Q53HL2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CDCA8Q53HL2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CDCA8Q53HL2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
CDCA8Q53HL2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC30.08■■■□□ 2.41
CDCA8Q53HL2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC30.08■■■□□ 2.41
CDCA8Q53HL2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC30.08■■■□□ 2.41
CDCA8Q53HL2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC30.08■■■□□ 2.41
CDCA8Q53HL2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC30.07■■■□□ 2.4
CDCA8Q53HL2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
CDCA8Q53HL2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC30.07■■■□□ 2.4
CDCA8Q53HL2 OR7E47P-201ENST00000546390 1422 ntBASIC30.07■■■□□ 2.4
CDCA8Q53HL2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CDCA8Q53HL2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CDCA8Q53HL2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
CDCA8Q53HL2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC30.07■■■□□ 2.4
CDCA8Q53HL2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC30.07■■■□□ 2.4
CDCA8Q53HL2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC30.06■■■□□ 2.4
CDCA8Q53HL2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDCA8Q53HL2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CDCA8Q53HL2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDCA8Q53HL2 KRT18P14-201ENST00000534205 1250 ntBASIC30.06■■■□□ 2.4
CDCA8Q53HL2 DUX4L2-201ENST00000561772 1275 ntBASIC30.06■■■□□ 2.4
CDCA8Q53HL2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC30.06■■■□□ 2.4
CDCA8Q53HL2 DUX4L6-201ENST00000626483 1275 ntBASIC30.06■■■□□ 2.4
CDCA8Q53HL2 DUX4L1-201ENST00000627662 1275 ntBASIC30.06■■■□□ 2.4
CDCA8Q53HL2 DUX4L8-201ENST00000629013 1275 ntBASIC30.06■■■□□ 2.4
CDCA8Q53HL2 DUX4L3-201ENST00000630187 1275 ntBASIC30.06■■■□□ 2.4
CDCA8Q53HL2 DUX4L7-201ENST00000630678 1275 ntBASIC30.06■■■□□ 2.4
CDCA8Q53HL2 DUX4L5-201ENST00000630834 1275 ntBASIC30.06■■■□□ 2.4
CDCA8Q53HL2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC30.06■■■□□ 2.4
CDCA8Q53HL2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDCA8Q53HL2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC30.06■■■□□ 2.4
CDCA8Q53HL2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDCA8Q53HL2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDCA8Q53HL2 LINC00526-201ENST00000581067 1875 ntBASIC30.06■■■□□ 2.4
CDCA8Q53HL2 AC009237.3-201ENST00000393279 1427 ntBASIC30.05■■■□□ 2.4
CDCA8Q53HL2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDCA8Q53HL2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDCA8Q53HL2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDCA8Q53HL2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CDCA8Q53HL2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CDCA8Q53HL2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC30.05■■■□□ 2.4
CDCA8Q53HL2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC30.05■■■□□ 2.4
CDCA8Q53HL2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC30.05■■■□□ 2.4
CDCA8Q53HL2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CDCA8Q53HL2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CDCA8Q53HL2 AL162430.1-201ENST00000480705 870 ntBASIC30.04■■■□□ 2.4
CDCA8Q53HL2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC30.04■■■□□ 2.4
CDCA8Q53HL2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CDCA8Q53HL2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC30.04■■■□□ 2.4
CDCA8Q53HL2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CDCA8Q53HL2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
CDCA8Q53HL2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CDCA8Q53HL2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC30.03■■■□□ 2.4
CDCA8Q53HL2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CDCA8Q53HL2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CDCA8Q53HL2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CDCA8Q53HL2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CDCA8Q53HL2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CDCA8Q53HL2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC30.03■■■□□ 2.4
CDCA8Q53HL2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CDCA8Q53HL2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC30.03■■■□□ 2.4
CDCA8Q53HL2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC30.03■■■□□ 2.4
CDCA8Q53HL2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC30.03■■■□□ 2.4
CDCA8Q53HL2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CDCA8Q53HL2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC30.03■■■□□ 2.4
CDCA8Q53HL2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CDCA8Q53HL2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CDCA8Q53HL2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC30.02■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms