Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TBC1D28Q2M2D7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TBC1D28Q2M2D7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.89■□□□□ 0.61
TBC1D28Q2M2D7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.89■□□□□ 0.61
TBC1D28Q2M2D7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.89■□□□□ 0.61
TBC1D28Q2M2D7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.89■□□□□ 0.61
TBC1D28Q2M2D7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.89■□□□□ 0.61
TBC1D28Q2M2D7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.89■□□□□ 0.61
TBC1D28Q2M2D7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TBC1D28Q2M2D7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TBC1D28Q2M2D7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TBC1D28Q2M2D7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TBC1D28Q2M2D7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TBC1D28Q2M2D7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TBC1D28Q2M2D7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D28Q2M2D7 AC127496.7-201ENST00000625110 1798 ntBASIC18.88■□□□□ 0.61
TBC1D28Q2M2D7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D28Q2M2D7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D28Q2M2D7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D28Q2M2D7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D28Q2M2D7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
TBC1D28Q2M2D7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.88■□□□□ 0.61
TBC1D28Q2M2D7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D28Q2M2D7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
TBC1D28Q2M2D7 OXCT2P1-201ENST00000447263 1535 ntBASIC18.88■□□□□ 0.61
TBC1D28Q2M2D7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D28Q2M2D7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D28Q2M2D7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TBC1D28Q2M2D7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.88■□□□□ 0.61
TBC1D28Q2M2D7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TBC1D28Q2M2D7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TBC1D28Q2M2D7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TBC1D28Q2M2D7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TBC1D28Q2M2D7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.87■□□□□ 0.61
TBC1D28Q2M2D7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.87■□□□□ 0.61
TBC1D28Q2M2D7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.87■□□□□ 0.61
TBC1D28Q2M2D7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TBC1D28Q2M2D7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 AC233723.2-201ENST00000623798 2106 ntBASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 AC079089.2-201ENST00000531211 1277 ntBASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D28Q2M2D7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D28Q2M2D7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TBC1D28Q2M2D7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D28Q2M2D7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TBC1D28Q2M2D7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D28Q2M2D7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D28Q2M2D7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.85■□□□□ 0.61
TBC1D28Q2M2D7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D28Q2M2D7 AC105265.2-201ENST00000467189 838 ntBASIC18.85■□□□□ 0.61
TBC1D28Q2M2D7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.85■□□□□ 0.61
TBC1D28Q2M2D7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D28Q2M2D7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TBC1D28Q2M2D7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D28Q2M2D7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms