Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC3A1Q07837 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC3A1Q07837 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC3A1Q07837 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC3A1Q07837 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC3A1Q07837 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SLC3A1Q07837 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SLC3A1Q07837 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC3A1Q07837 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC3A1Q07837 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC3A1Q07837 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC3A1Q07837 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC3A1Q07837 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC3A1Q07837 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC3A1Q07837 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SLC3A1Q07837 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC3A1Q07837 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
SLC3A1Q07837 AC144652.1-201ENST00000609974 1624 ntBASIC19.47■□□□□ 0.71
SLC3A1Q07837 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC3A1Q07837 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC3A1Q07837 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC3A1Q07837 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC3A1Q07837 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC3A1Q07837 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC3A1Q07837 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC3A1Q07837 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC3A1Q07837 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC3A1Q07837 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC3A1Q07837 AC026310.3-201ENST00000625186 2373 ntBASIC19.46■□□□□ 0.71
SLC3A1Q07837 MIR6722-201ENST00000617286 78 ntBASIC19.46■□□□□ 0.71
SLC3A1Q07837 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.46■□□□□ 0.71
SLC3A1Q07837 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.46■□□□□ 0.71
SLC3A1Q07837 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC3A1Q07837 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SLC3A1Q07837 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC3A1Q07837 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC3A1Q07837 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC3A1Q07837 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC3A1Q07837 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC3A1Q07837 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC3A1Q07837 SNX5-217ENST00000606557 1087 ntBASIC19.45■□□□□ 0.7
SLC3A1Q07837 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC3A1Q07837 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC3A1Q07837 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC3A1Q07837 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC3A1Q07837 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC3A1Q07837 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC3A1Q07837 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC3A1Q07837 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC3A1Q07837 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC3A1Q07837 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SLC3A1Q07837 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC3A1Q07837 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC3A1Q07837 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC3A1Q07837 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC3A1Q07837 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.44■□□□□ 0.7
SLC3A1Q07837 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.44■□□□□ 0.7
SLC3A1Q07837 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC3A1Q07837 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC3A1Q07837 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SLC3A1Q07837 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.44■□□□□ 0.7
SLC3A1Q07837 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC3A1Q07837 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC3A1Q07837 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC3A1Q07837 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SLC3A1Q07837 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC3A1Q07837 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC3A1Q07837 FAM99A-202ENST00000538190 1989 ntBASIC19.43■□□□□ 0.7
SLC3A1Q07837 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC3A1Q07837 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC3A1Q07837 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC3A1Q07837 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC3A1Q07837 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.43■□□□□ 0.7
SLC3A1Q07837 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC3A1Q07837 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC3A1Q07837 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SLC3A1Q07837 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SLC3A1Q07837 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC3A1Q07837 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC3A1Q07837 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC3A1Q07837 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SLC3A1Q07837 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC3A1Q07837 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC3A1Q07837 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC3A1Q07837 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC3A1Q07837 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC3A1Q07837 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC3A1Q07837 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC3A1Q07837 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC3A1Q07837 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SLC3A1Q07837 AL356740.2-201ENST00000601559 647 ntBASIC19.42■□□□□ 0.7
SLC3A1Q07837 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC3A1Q07837 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC3A1Q07837 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC3A1Q07837 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC3A1Q07837 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC3A1Q07837 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SLC3A1Q07837 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC3A1Q07837 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC3A1Q07837 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms