Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 MAF1YDR005C 1188 nt4.36□□□□□ -1.71
RKR1Q04781 YFR032C-BYFR032C-B 264 nt4.36□□□□□ -1.71
RKR1Q04781 MPS2YGL075C 1164 nt4.36□□□□□ -1.71
RKR1Q04781 CSR2YPR030W 3366 nt4.35□□□□□ -1.71
RKR1Q04781 SAP155YFR040W 3009 nt4.35□□□□□ -1.71
RKR1Q04781 OSW7YFR039C 1533 nt4.35□□□□□ -1.71
RKR1Q04781 YGR016WYGR016W 573 nt4.35□□□□□ -1.71
RKR1Q04781 RPL17AYKL180W 555 nt4.35□□□□□ -1.71
RKR1Q04781 JIP3YLR331C 378 nt4.35□□□□□ -1.71
RKR1Q04781 SDS23YGL056C 1584 nt4.34□□□□□ -1.71
RKR1Q04781 YLR255CYLR255C 354 nt4.34□□□□□ -1.71
RKR1Q04781 DGK1YOR311C 873 nt4.34□□□□□ -1.71
RKR1Q04781 YBR298C-AYBR298C-A 222 nt4.34□□□□□ -1.71
RKR1Q04781 WTM2YOR229W 1404 nt4.34□□□□□ -1.71
RKR1Q04781 ESL2YKR096W 3588 nt4.34□□□□□ -1.72
RKR1Q04781 YHR080CYHR080C 4038 nt4.34□□□□□ -1.72
RKR1Q04781 SMC6YLR383W 3345 nt4.33□□□□□ -1.72
RKR1Q04781 RIM4YHL024W 2142 nt4.33□□□□□ -1.72
RKR1Q04781 GCD1YOR260W 1737 nt4.33□□□□□ -1.72
RKR1Q04781 APM4YOL062C 1476 nt4.33□□□□□ -1.72
RKR1Q04781 ASG7YJL170C 630 nt4.33□□□□□ -1.72
RKR1Q04781 MGM101YJR144W 810 nt4.33□□□□□ -1.72
RKR1Q04781 RPL6AYML073C 531 nt4.33□□□□□ -1.72
RKR1Q04781 SSY1YDR160W 2559 nt4.33□□□□□ -1.72
RKR1Q04781 PET54YGR222W 882 nt4.32□□□□□ -1.72
RKR1Q04781 NEW1YPL226W 3591 nt4.32□□□□□ -1.72
RKR1Q04781 PTP3YER075C 2787 nt4.32□□□□□ -1.72
RKR1Q04781 YLR177WYLR177W 1887 nt4.32□□□□□ -1.72
RKR1Q04781 YDR396WYDR396W 501 nt4.31□□□□□ -1.72
RKR1Q04781 YDR537CYDR537C 606 nt4.31□□□□□ -1.72
RKR1Q04781 COX17YLL009C 210 nt4.31□□□□□ -1.72
RKR1Q04781 LDS2YOL047C 1071 nt4.31□□□□□ -1.72
RKR1Q04781 PAP2YOL115W 1755 nt4.31□□□□□ -1.72
RKR1Q04781 YDR306CYDR306C 1437 nt4.31□□□□□ -1.72
RKR1Q04781 RPA190YOR341W 4995 nt4.31□□□□□ -1.72
RKR1Q04781 YRM1YOR172W 2361 nt4.31□□□□□ -1.72
RKR1Q04781 UBC1YDR177W 648 nt4.31□□□□□ -1.72
RKR1Q04781 MHO1YJR008W 1017 nt4.31□□□□□ -1.72
RKR1Q04781 YLL017WYLL017W 312 nt4.31□□□□□ -1.72
RKR1Q04781 AST2YER101C 1293 nt4.3□□□□□ -1.72
RKR1Q04781 OM14YBR230C 405 nt4.3□□□□□ -1.72
RKR1Q04781 SRC1YML034W 2505 nt4.29□□□□□ -1.72
RKR1Q04781 SDH3YKL141W 597 nt4.29□□□□□ -1.72
RKR1Q04781 SFH1YLR321C 1281 nt4.29□□□□□ -1.72
RKR1Q04781 KTI11YBL071W-A 249 nt4.29□□□□□ -1.72
RKR1Q04781 DDI3YNL335W 678 nt4.29□□□□□ -1.72
RKR1Q04781 YGK3YOL128C 1128 nt4.29□□□□□ -1.72
RKR1Q04781 YLR352WYLR352W 2424 nt4.29□□□□□ -1.72
RKR1Q04781 ABP140YOR239W 1887 nt4.29□□□□□ -1.72
RKR1Q04781 SSA2YLL024C 1920 nt4.28□□□□□ -1.72
RKR1Q04781 CLB3YDL155W 1284 nt4.28□□□□□ -1.72
RKR1Q04781 tW(CCA)G1tW(CCA)G1 72 nt4.28□□□□□ -1.72
RKR1Q04781 tW(CCA)G2tW(CCA)G2 72 nt4.28□□□□□ -1.72
RKR1Q04781 tW(CCA)JtW(CCA)J 72 nt4.28□□□□□ -1.72
RKR1Q04781 tW(CCA)KtW(CCA)K 72 nt4.28□□□□□ -1.72
RKR1Q04781 tW(CCA)MtW(CCA)M 72 nt4.28□□□□□ -1.72
RKR1Q04781 tW(CCA)PtW(CCA)P 72 nt4.28□□□□□ -1.72
RKR1Q04781 ECM2YBR065C 1095 nt4.28□□□□□ -1.72
RKR1Q04781 YLR278CYLR278C 4026 nt4.28□□□□□ -1.72
RKR1Q04781 MSS1YMR023C 1581 nt4.28□□□□□ -1.72
RKR1Q04781 GYP7YDL234C 2241 nt4.28□□□□□ -1.72
RKR1Q04781 ROK1YGL171W 1695 nt4.28□□□□□ -1.72
RKR1Q04781 RRP46YGR095C 672 nt4.27□□□□□ -1.73
RKR1Q04781 YOR385WYOR385W 873 nt4.27□□□□□ -1.73
RKR1Q04781 YCL023CYCL023C 348 nt4.27□□□□□ -1.73
RKR1Q04781 YHR032W-AYHR032W-A 180 nt4.27□□□□□ -1.73
RKR1Q04781 TIS11YLR136C 858 nt4.27□□□□□ -1.73
RKR1Q04781 RHO5YNL180C 996 nt4.27□□□□□ -1.73
RKR1Q04781 TSR1YDL060W 2367 nt4.26□□□□□ -1.73
RKR1Q04781 RPL13AYDL082W 600 nt4.26□□□□□ -1.73
RKR1Q04781 CDC6YJL194W 1542 nt4.26□□□□□ -1.73
RKR1Q04781 URK1YNR012W 1506 nt4.26□□□□□ -1.73
RKR1Q04781 GCR2YNL199C 1605 nt4.26□□□□□ -1.73
RKR1Q04781 XRN1YGL173C 4587 nt4.25□□□□□ -1.73
RKR1Q04781 PSY2YNL201C 2577 nt4.25□□□□□ -1.73
RKR1Q04781 YMR085WYMR085W 1299 nt4.25□□□□□ -1.73
RKR1Q04781 CUZ1YNL155W 825 nt4.25□□□□□ -1.73
RKR1Q04781 MRPL37YBR268W 318 nt4.25□□□□□ -1.73
RKR1Q04781 ULS1YOR191W 4860 nt4.25□□□□□ -1.73
RKR1Q04781 KIP1YBL063W 3336 nt4.25□□□□□ -1.73
RKR1Q04781 DAP2YHR028C 2457 nt4.25□□□□□ -1.73
RKR1Q04781 PEX1YKL197C 3132 nt4.24□□□□□ -1.73
RKR1Q04781 ARP8YOR141C 2646 nt4.24□□□□□ -1.73
RKR1Q04781 YCR101CYCR101C 549 nt4.24□□□□□ -1.73
RKR1Q04781 RAD17YOR368W 1206 nt4.24□□□□□ -1.73
RKR1Q04781 PDR1YGL013C 3207 nt4.24□□□□□ -1.73
RKR1Q04781 SPA2YLL021W 4401 nt4.24□□□□□ -1.73
RKR1Q04781 TRE2YOR256C 2430 nt4.23□□□□□ -1.73
RKR1Q04781 RTT103YDR289C 1230 nt4.23□□□□□ -1.73
RKR1Q04781 ARP1YHR129C 1155 nt4.23□□□□□ -1.73
RKR1Q04781 YAL037WYAL037W 804 nt4.23□□□□□ -1.73
RKR1Q04781 EMC6YLL014W 327 nt4.23□□□□□ -1.73
RKR1Q04781 TUL1YKL034W 2277 nt4.23□□□□□ -1.73
RKR1Q04781 GCD6YDR211W 2139 nt4.23□□□□□ -1.73
RKR1Q04781 STP2YHR006W 1626 nt4.23□□□□□ -1.73
RKR1Q04781 DHH1YDL160C 1521 nt4.23□□□□□ -1.73
RKR1Q04781 SEC9YGR009C 1956 nt4.23□□□□□ -1.73
RKR1Q04781 CCT7YJL111W 1653 nt4.23□□□□□ -1.73
RKR1Q04781 YDR274CYDR274C 372 nt4.23□□□□□ -1.73
RKR1Q04781 YOR186WYOR186W 435 nt4.23□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 25 ms