Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PHC1P78364 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.69■□□□□ 0.9
PHC1P78364 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PHC1P78364 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHC1P78364 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PHC1P78364 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PHC1P78364 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.69■□□□□ 0.9
PHC1P78364 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHC1P78364 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHC1P78364 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.69■□□□□ 0.9
PHC1P78364 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHC1P78364 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
PHC1P78364 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHC1P78364 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHC1P78364 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PHC1P78364 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHC1P78364 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHC1P78364 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PHC1P78364 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PHC1P78364 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.68■□□□□ 0.9
PHC1P78364 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.68■□□□□ 0.9
PHC1P78364 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.68■□□□□ 0.9
PHC1P78364 MIR6724-1-201ENST00000616420 92 ntBASIC20.68■□□□□ 0.9
PHC1P78364 MIR6724-2-201ENST00000616483 92 ntBASIC20.68■□□□□ 0.9
PHC1P78364 MIR6724-4-201ENST00000617390 92 ntBASIC20.68■□□□□ 0.9
PHC1P78364 MIR6724-3-201ENST00000622482 92 ntBASIC20.68■□□□□ 0.9
PHC1P78364 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PHC1P78364 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
PHC1P78364 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PHC1P78364 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PHC1P78364 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHC1P78364 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHC1P78364 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHC1P78364 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.67■□□□□ 0.9
PHC1P78364 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHC1P78364 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.67■□□□□ 0.9
PHC1P78364 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHC1P78364 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHC1P78364 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PHC1P78364 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PHC1P78364 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHC1P78364 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PHC1P78364 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHC1P78364 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
PHC1P78364 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.66■□□□□ 0.9
PHC1P78364 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHC1P78364 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHC1P78364 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHC1P78364 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHC1P78364 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHC1P78364 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHC1P78364 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PHC1P78364 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHC1P78364 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHC1P78364 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PHC1P78364 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHC1P78364 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.65■□□□□ 0.9
PHC1P78364 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.65■□□□□ 0.9
PHC1P78364 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PHC1P78364 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
PHC1P78364 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHC1P78364 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHC1P78364 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHC1P78364 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.65■□□□□ 0.9
PHC1P78364 AL117332.1-201ENST00000622628 974 ntBASIC20.65■□□□□ 0.9
PHC1P78364 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PHC1P78364 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
PHC1P78364 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PHC1P78364 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PHC1P78364 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PHC1P78364 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PHC1P78364 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PHC1P78364 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.64■□□□□ 0.9
PHC1P78364 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHC1P78364 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHC1P78364 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHC1P78364 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PHC1P78364 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHC1P78364 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHC1P78364 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHC1P78364 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHC1P78364 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHC1P78364 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.63■□□□□ 0.89
PHC1P78364 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHC1P78364 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.63■□□□□ 0.89
PHC1P78364 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHC1P78364 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.63■□□□□ 0.89
PHC1P78364 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PHC1P78364 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHC1P78364 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHC1P78364 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHC1P78364 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.63■□□□□ 0.89
PHC1P78364 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHC1P78364 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHC1P78364 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PHC1P78364 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHC1P78364 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PHC1P78364 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHC1P78364 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.62■□□□□ 0.89
PHC1P78364 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms