Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PEX3P56589 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PEX3P56589 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24■■□□□ 1.43
PEX3P56589 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
PEX3P56589 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
PEX3P56589 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.99■■□□□ 1.43
PEX3P56589 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PEX3P56589 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PEX3P56589 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PEX3P56589 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
PEX3P56589 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
PEX3P56589 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
PEX3P56589 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PEX3P56589 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.99■■□□□ 1.43
PEX3P56589 AC079089.2-201ENST00000531211 1277 ntBASIC23.99■■□□□ 1.43
PEX3P56589 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.99■■□□□ 1.43
PEX3P56589 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
PEX3P56589 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PEX3P56589 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PEX3P56589 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PEX3P56589 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.98■■□□□ 1.43
PEX3P56589 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.98■■□□□ 1.43
PEX3P56589 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.98■■□□□ 1.43
PEX3P56589 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.98■■□□□ 1.43
PEX3P56589 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.98■■□□□ 1.43
PEX3P56589 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.98■■□□□ 1.43
PEX3P56589 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PEX3P56589 AC133561.1-201ENST00000568600 2415 ntBASIC23.98■■□□□ 1.43
PEX3P56589 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
PEX3P56589 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PEX3P56589 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PEX3P56589 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PEX3P56589 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PEX3P56589 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.97■■□□□ 1.43
PEX3P56589 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.97■■□□□ 1.43
PEX3P56589 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
PEX3P56589 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.97■■□□□ 1.43
PEX3P56589 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.97■■□□□ 1.43
PEX3P56589 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PEX3P56589 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PEX3P56589 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.97■■□□□ 1.43
PEX3P56589 AC012414.1-201ENST00000556676 535 ntBASIC23.97■■□□□ 1.43
PEX3P56589 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
PEX3P56589 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
PEX3P56589 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PEX3P56589 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PEX3P56589 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PEX3P56589 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.96■■□□□ 1.43
PEX3P56589 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PEX3P56589 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PEX3P56589 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PEX3P56589 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PEX3P56589 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PEX3P56589 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PEX3P56589 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.96■■□□□ 1.43
PEX3P56589 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.96■■□□□ 1.43
PEX3P56589 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.96■■□□□ 1.43
PEX3P56589 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.96■■□□□ 1.43
PEX3P56589 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.96■■□□□ 1.43
PEX3P56589 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
PEX3P56589 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PEX3P56589 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
PEX3P56589 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PEX3P56589 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PEX3P56589 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PEX3P56589 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PEX3P56589 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.95■■□□□ 1.42
PEX3P56589 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PEX3P56589 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PEX3P56589 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.95■■□□□ 1.42
PEX3P56589 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PEX3P56589 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.95■■□□□ 1.42
PEX3P56589 SMUG1P1-201ENST00000590640 811 ntBASIC23.95■■□□□ 1.42
PEX3P56589 MIR6084-201ENST00000622012 110 ntBASIC23.95■■□□□ 1.42
PEX3P56589 AL358852.1-201ENST00000623174 1268 ntBASIC23.95■■□□□ 1.42
PEX3P56589 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PEX3P56589 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PEX3P56589 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PEX3P56589 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PEX3P56589 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.95■■□□□ 1.42
PEX3P56589 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.95■■□□□ 1.42
PEX3P56589 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.94■■□□□ 1.42
PEX3P56589 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.94■■□□□ 1.42
PEX3P56589 LINC00526-201ENST00000581067 1875 ntBASIC23.94■■□□□ 1.42
PEX3P56589 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PEX3P56589 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PEX3P56589 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PEX3P56589 AL354811.1-201ENST00000610286 706 ntBASIC23.94■■□□□ 1.42
PEX3P56589 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.94■■□□□ 1.42
PEX3P56589 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.94■■□□□ 1.42
PEX3P56589 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.94■■□□□ 1.42
PEX3P56589 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PEX3P56589 AC127496.7-201ENST00000625110 1798 ntBASIC23.93■■□□□ 1.42
PEX3P56589 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PEX3P56589 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PEX3P56589 AC080038.3-201ENST00000623346 1952 ntBASIC23.93■■□□□ 1.42
PEX3P56589 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PEX3P56589 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PEX3P56589 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PEX3P56589 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms