Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PAX9P55771 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.47■□□□□ 0.39
PAX9P55771 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAX9P55771 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAX9P55771 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.47■□□□□ 0.39
PAX9P55771 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAX9P55771 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.47■□□□□ 0.39
PAX9P55771 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAX9P55771 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PAX9P55771 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PAX9P55771 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PAX9P55771 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAX9P55771 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.47■□□□□ 0.39
PAX9P55771 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.47■□□□□ 0.39
PAX9P55771 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PAX9P55771 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
PAX9P55771 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PAX9P55771 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.46■□□□□ 0.39
PAX9P55771 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PAX9P55771 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.46■□□□□ 0.39
PAX9P55771 DUX4L18-201ENST00000553347 1267 ntBASIC17.46■□□□□ 0.39
PAX9P55771 DUX4L4-201ENST00000566884 1269 ntBASIC17.46■□□□□ 0.39
PAX9P55771 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.46■□□□□ 0.39
PAX9P55771 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PAX9P55771 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PAX9P55771 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.46■□□□□ 0.39
PAX9P55771 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.46■□□□□ 0.39
PAX9P55771 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PAX9P55771 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAX9P55771 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
PAX9P55771 PVT1_1.1-201ENST00000615125 194 ntBASIC17.45■□□□□ 0.38
PAX9P55771 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PAX9P55771 PKD1P6-201ENST00000343738 4769 ntBASIC17.45■□□□□ 0.38
PAX9P55771 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAX9P55771 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAX9P55771 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAX9P55771 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAX9P55771 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.45■□□□□ 0.38
PAX9P55771 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAX9P55771 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAX9P55771 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.44■□□□□ 0.38
PAX9P55771 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAX9P55771 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAX9P55771 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAX9P55771 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAX9P55771 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAX9P55771 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAX9P55771 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAX9P55771 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.44■□□□□ 0.38
PAX9P55771 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.44■□□□□ 0.38
PAX9P55771 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAX9P55771 LINC01521-201ENST00000504184 1943 ntBASIC17.44■□□□□ 0.38
PAX9P55771 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.44■□□□□ 0.38
PAX9P55771 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAX9P55771 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAX9P55771 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAX9P55771 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.43■□□□□ 0.38
PAX9P55771 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAX9P55771 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PAX9P55771 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAX9P55771 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAX9P55771 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.43■□□□□ 0.38
PAX9P55771 AL121603.2-201ENST00000557373 2117 ntBASIC17.43■□□□□ 0.38
PAX9P55771 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.43■□□□□ 0.38
PAX9P55771 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PAX9P55771 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.43■□□□□ 0.38
PAX9P55771 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.43■□□□□ 0.38
PAX9P55771 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.43■□□□□ 0.38
PAX9P55771 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PAX9P55771 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAX9P55771 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PAX9P55771 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAX9P55771 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PAX9P55771 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PAX9P55771 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAX9P55771 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PAX9P55771 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAX9P55771 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAX9P55771 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.42■□□□□ 0.38
PAX9P55771 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.42■□□□□ 0.38
PAX9P55771 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.42■□□□□ 0.38
PAX9P55771 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.42■□□□□ 0.38
PAX9P55771 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.42■□□□□ 0.38
PAX9P55771 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PAX9P55771 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PAX9P55771 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAX9P55771 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PAX9P55771 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PAX9P55771 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.42■□□□□ 0.38
PAX9P55771 AC092667.1-201ENST00000434301 2586 ntBASIC17.41■□□□□ 0.38
PAX9P55771 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAX9P55771 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.41■□□□□ 0.38
PAX9P55771 AC004687.1-201ENST00000579003 1625 ntBASIC17.41■□□□□ 0.38
PAX9P55771 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.41■□□□□ 0.38
PAX9P55771 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAX9P55771 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PAX9P55771 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PAX9P55771 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAX9P55771 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PAX9P55771 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms