Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.51■■□□□ 1.03
CLNS1AP54105 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLNS1AP54105 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLNS1AP54105 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.51■■□□□ 1.03
CLNS1AP54105 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.51■■□□□ 1.03
CLNS1AP54105 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLNS1AP54105 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLNS1AP54105 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLNS1AP54105 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.5■■□□□ 1.03
CLNS1AP54105 AF131216.4-201ENST00000638924 1588 ntBASIC21.5■■□□□ 1.03
CLNS1AP54105 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLNS1AP54105 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLNS1AP54105 MIR4281-201ENST00000580852 62 ntBASIC21.5■■□□□ 1.03
CLNS1AP54105 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CLNS1AP54105 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CLNS1AP54105 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLNS1AP54105 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLNS1AP54105 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLNS1AP54105 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CLNS1AP54105 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLNS1AP54105 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.49■■□□□ 1.03
CLNS1AP54105 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLNS1AP54105 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLNS1AP54105 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.49■■□□□ 1.03
CLNS1AP54105 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLNS1AP54105 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.49■■□□□ 1.03
CLNS1AP54105 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.49■■□□□ 1.03
CLNS1AP54105 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.49■■□□□ 1.03
CLNS1AP54105 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLNS1AP54105 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLNS1AP54105 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLNS1AP54105 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CLNS1AP54105 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLNS1AP54105 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CLNS1AP54105 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLNS1AP54105 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLNS1AP54105 ATP5G2P3-201ENST00000429083 425 ntBASIC21.48■■□□□ 1.03
CLNS1AP54105 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.48■■□□□ 1.03
CLNS1AP54105 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLNS1AP54105 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLNS1AP54105 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLNS1AP54105 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLNS1AP54105 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLNS1AP54105 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLNS1AP54105 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CLNS1AP54105 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLNS1AP54105 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.47■■□□□ 1.03
CLNS1AP54105 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.47■■□□□ 1.03
CLNS1AP54105 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.47■■□□□ 1.03
CLNS1AP54105 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLNS1AP54105 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLNS1AP54105 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLNS1AP54105 AC004987.1-201ENST00000428627 508 ntBASIC21.47■■□□□ 1.03
CLNS1AP54105 AC004448.1-201ENST00000458332 883 ntBASIC21.47■■□□□ 1.03
CLNS1AP54105 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CLNS1AP54105 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.47■■□□□ 1.03
CLNS1AP54105 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLNS1AP54105 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.47■■□□□ 1.03
CLNS1AP54105 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLNS1AP54105 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CLNS1AP54105 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CLNS1AP54105 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLNS1AP54105 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLNS1AP54105 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CLNS1AP54105 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
CLNS1AP54105 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLNS1AP54105 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.46■■□□□ 1.03
CLNS1AP54105 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLNS1AP54105 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.46■■□□□ 1.03
CLNS1AP54105 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.46■■□□□ 1.03
CLNS1AP54105 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLNS1AP54105 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
CLNS1AP54105 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CLNS1AP54105 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLNS1AP54105 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLNS1AP54105 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.45■■□□□ 1.02
CLNS1AP54105 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CLNS1AP54105 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.45■■□□□ 1.02
CLNS1AP54105 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLNS1AP54105 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLNS1AP54105 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.45■■□□□ 1.02
CLNS1AP54105 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CLNS1AP54105 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLNS1AP54105 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.44■■□□□ 1.02
CLNS1AP54105 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLNS1AP54105 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLNS1AP54105 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLNS1AP54105 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.44■■□□□ 1.02
CLNS1AP54105 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLNS1AP54105 C11orf96-202ENST00000528572 1834 ntBASIC21.44■■□□□ 1.02
CLNS1AP54105 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLNS1AP54105 PVT1_1.1-201ENST00000615125 194 ntBASIC21.44■■□□□ 1.02
CLNS1AP54105 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.44■■□□□ 1.02
CLNS1AP54105 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
CLNS1AP54105 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
CLNS1AP54105 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.44■■□□□ 1.02
CLNS1AP54105 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CLNS1AP54105 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.43■■□□□ 1.02
CLNS1AP54105 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.43■■□□□ 1.02
CLNS1AP54105 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms