Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC25A1P53007 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SLC25A1P53007 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SLC25A1P53007 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC25A1P53007 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC25A1P53007 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC25A1P53007 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC25A1P53007 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC25A1P53007 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC25A1P53007 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC25A1P53007 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SLC25A1P53007 AC133637.1-201ENST00000624115 1537 ntBASIC19.34■□□□□ 0.69
SLC25A1P53007 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC25A1P53007 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC25A1P53007 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
SLC25A1P53007 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC25A1P53007 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC25A1P53007 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.33■□□□□ 0.69
SLC25A1P53007 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SLC25A1P53007 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC25A1P53007 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SLC25A1P53007 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC25A1P53007 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SLC25A1P53007 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.33■□□□□ 0.69
SLC25A1P53007 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
SLC25A1P53007 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.33■□□□□ 0.68
SLC25A1P53007 KRT16P3-201ENST00000439127 1283 ntBASIC19.33■□□□□ 0.68
SLC25A1P53007 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC25A1P53007 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.33■□□□□ 0.68
SLC25A1P53007 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC25A1P53007 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC25A1P53007 AC244015.2-201ENST00000616358 1861 ntBASIC19.33■□□□□ 0.68
SLC25A1P53007 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC25A1P53007 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC25A1P53007 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC25A1P53007 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SLC25A1P53007 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC25A1P53007 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC25A1P53007 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC25A1P53007 AC079089.2-201ENST00000531211 1277 ntBASIC19.32■□□□□ 0.68
SLC25A1P53007 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC25A1P53007 pRNA.6-201ENST00000610482 90 ntBASIC19.32■□□□□ 0.68
SLC25A1P53007 pRNA.5-201ENST00000612139 90 ntBASIC19.32■□□□□ 0.68
SLC25A1P53007 pRNA.11-201ENST00000618423 90 ntBASIC19.32■□□□□ 0.68
SLC25A1P53007 pRNA.13-201ENST00000619112 90 ntBASIC19.32■□□□□ 0.68
SLC25A1P53007 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC25A1P53007 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC25A1P53007 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC25A1P53007 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC25A1P53007 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC25A1P53007 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC25A1P53007 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC25A1P53007 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SLC25A1P53007 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC25A1P53007 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
SLC25A1P53007 AC026310.3-201ENST00000625186 2373 ntBASIC19.31■□□□□ 0.68
SLC25A1P53007 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC25A1P53007 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.31■□□□□ 0.68
SLC25A1P53007 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC25A1P53007 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC25A1P53007 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC25A1P53007 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC25A1P53007 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC25A1P53007 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC25A1P53007 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
SLC25A1P53007 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC25A1P53007 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SLC25A1P53007 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SLC25A1P53007 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC25A1P53007 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC25A1P53007 AC006455.2-201ENST00000429931 906 ntBASIC19.3■□□□□ 0.68
SLC25A1P53007 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC25A1P53007 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC25A1P53007 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC25A1P53007 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC25A1P53007 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC25A1P53007 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC25A1P53007 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC25A1P53007 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC25A1P53007 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC25A1P53007 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC25A1P53007 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SLC25A1P53007 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC25A1P53007 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.29■□□□□ 0.68
SLC25A1P53007 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC25A1P53007 AL356740.2-201ENST00000601559 647 ntBASIC19.29■□□□□ 0.68
SLC25A1P53007 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC25A1P53007 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC25A1P53007 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC25A1P53007 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SLC25A1P53007 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC25A1P53007 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC25A1P53007 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC25A1P53007 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC25A1P53007 AL137060.1-201ENST00000618151 2648 ntBASIC19.28■□□□□ 0.68
SLC25A1P53007 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC25A1P53007 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SLC25A1P53007 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC25A1P53007 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC25A1P53007 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms